PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68537.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GRF

Protein Properties

Length: 392aa MW: 43509.9 Da PI: 9.7452

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.7	4.3e-23	84	128	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH++rgr rsrk++e+ OWM68537.1 84 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMNRGRYRSRKHVES 128 79****************************************997 PP
2	QLQ	59.8	8e-21	23	57	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTaaQ+q+L++Q++++KyL a+++vPp+Ll++i OWM68537.1 23 PFTAAQWQELEHQAMIFKYLKAGLQVPPDLLAPIH 57 9********************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MSGGGGSSLG GGSGGGGGVC WPPFTAAQWQ ELEHQAMIFK YLKAGLQVPP DLLAPIHRSL 60 ESMSARFLQY PTLGYYSFYG KKIDPEPGRC RRTDGKKWRC SKDAHPDSKY CERHMNRGRY 120 RSRKHVESSQ TPASSQSLQT PALNVGIGSN SGGGRTYQNL PVHSTSSVTL SFGTQSHPSQ 180 LHMESTPYGS SNKYSELKTQ VELHKSLAEA SSGSSRGLEM KSMIDFQNPS SRAPMALLSE 240 SRSGLPLQGN YSSLQKQQQK QHYFFGTDFN SSGSGKHEEQ QQQQLVQPFF DEWPETRESS 300 RPFLDSQRTD MSLFSSTQLS MSIEKDPSRL LARDGQSPND LFKVPSLKLK LVAMVRPMIK 360 NQSKPRVPEG TELCHGICRA TRDCISRMSH CR

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MSGGGGSSLG GGSGGGGGVC WPPFTAAQWQ ELEHQAMIFK YLKAGLQVPP DLLAPIHRSL  60
ESMSARFLQY PTLGYYSFYG KKIDPEPGRC RRTDGKKWRC SKDAHPDSKY CERHMNRGRY  120
RSRKHVESSQ TPASSQSLQT PALNVGIGSN SGGGRTYQNL PVHSTSSVTL SFGTQSHPSQ  180
LHMESTPYGS SNKYSELKTQ VELHKSLAEA SSGSSRGLEM KSMIDFQNPS SRAPMALLSE  240
SRSGLPLQGN YSSLQKQQQK QHYFFGTDFN SSGSGKHEEQ QQQQLVQPFF DEWPETRESS  300
RPFLDSQRTD MSLFSSTQLS MSIEKDPSRL LARDGQSPND LFKVPSLKLK LVAMVRPMIK  360
NQSKPRVPEG TELCHGICRA TRDCISRMSH CR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-42	GRF family protein