PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68017.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 287aa MW: 30352.6 Da PI: 7.32

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.8	5.3e-13	12	55	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT eEd+++ +a + ++ + +W++Ia++++ g+t +++++++ OWM68017.1 12 SWTREEDKKFENALATYPEDssdRWEKIAAELP-GKTSEEVRLHY 55 7******************************.********9 PP
2	Myb_DNA-binding	42.7	1.3e-13	117	161	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky OWM68017.1 117 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 161 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MTVDEAASSS SSWTREEDKK FENALATYPE DSSDRWEKIA AELPGKTSEE VRLHYEILVD 60 DVNRIESGTV ELPPYSSPSE GSTSDEANGK KAGGSGHHES GHGGKGSRDQ ERRKGVAWTE 120 DEHRLFLLGL DKYGKGDWRS ISRNFVVTRT PTQVASHAQK YFIRLNSMNK DRRRSSIHDI 180 TSVGNGDISA LQPPITGQAN GPAAPSGSSG KPAKQPSQAV PAGPAGVGIY GGQTIGQPVG 240 GPLVSAVGTP VNLPAPAHVA YGVRAPVPAV VPGAPMTYPM PPAPSQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-99	MYB family protein