PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67665.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 349aa    MW: 37219 Da    PI: 8.3873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-10283328655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L+el+P+     +k  s +++L +Av++I+ Lq
  OWM67665.1 283 SIAERERRTRISGRLKKLQELVPNM----DKQTSYSDMLDLAVQHIRTLQ 328
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MYPSSSSSSS HNSIPSSSGG GLTRYVSAPG SLLTTAVDSV ISGAHRDFAS PHHAPPHPHP  60
QLQRPPPAPS PFGQYFSADS SSVNSESTCK VNASKDDGGG GGLHRSFGFS DLTVGSGSSS  120
SSPLVRQRSS PAGFLGQLTG DNAFSFTRGS GSSNGGHGVS RLKSQLSFTR QDSLSQISEG  180
SENMVDRVGQ ENGHPSGSHS YATTSFGIDS WENANSIVFS APPGKRAKNI DGDSYSFQPL  240
ETQFSLPQTT LEMATVEKLL QIPEDSVPCK IRAKRGCATH PRSIAERERR TRISGRLKKL  300
QELVPNMDKQ TSYSDMLDLA VQHIRTLQTQ VQKLRQELDN CTCGCTQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.12e-74bHLH family protein