PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67598.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 491aa MW: 55256.4 Da PI: 5.9774

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	94.2	1.4e-29	16	146	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT........................ CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks........................ 74 Fl k+ye+++d++++e++sws ++nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+Y + + ++ + OWM67598.1 16 FLLKTYEMVDDSATDEIVSWSPRKNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYLQSAGCKMINDYGRiamlenpmtqsdgifmvqnefdla 112 9******************999*******************************65544444433333567899999999999999888 PP .......XTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 75 .......kekiweFkhksFkkgkkellekikrkk 101 +++ weF+++ F k++k+ll++i+r+k OWM67598.1 113 dkgfrkiDPERWEFANEDFVKDQKHLLKNIHRRK 146 877665449**********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MEPAAAGGGG GGPAPFLLKT YEMVDDSATD EIVSWSPRKN SFVVWNPPEF ARVLLPTYFK 60 HNNFSSFIRQ LNTYLQSAGC KMINDYGRIA MLENPMTQSD GIFMVQNEFD LADKGFRKID 120 PERWEFANED FVKDQKHLLK NIHRRKPIHS HSQPQGTTLD SERATCDEEI DRLTHEKSTL 180 QAKLSKLKNQ QSMGKVQIEE LTDRVGKMEQ RQDELLAFIE KAIQNPTFIE HLARRIESFD 240 LSAYNKKRRL PRIENTLQPA VENSVDNLSS SRPESGNIYH QDFTDKLRLE LSPAVSDINL 300 VSHSTQSSNE GGSPQRIILE GDPRETQTPQ RQGGILFTPE PLELSDTGTS FTFKMDSSLH 360 QKSPIGEGPR NLSPREEGEN SISCHLNLTL ASSPLQVEKP TPVKESGLGV SSKSRNHAGN 420 ECPKNNNQGS GPPRGRVNDV FWEQFLTERP GSLDNEEASS NYRTNPYDEQ DDRRSGQGVS 480 KNAKNMERLS L

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MEPAAAGGGG GGPAPFLLKT YEMVDDSATD EIVSWSPRKN SFVVWNPPEF ARVLLPTYFK  60
HNNFSSFIRQ LNTYLQSAGC KMINDYGRIA MLENPMTQSD GIFMVQNEFD LADKGFRKID  120
PERWEFANED FVKDQKHLLK NIHRRKPIHS HSQPQGTTLD SERATCDEEI DRLTHEKSTL  180
QAKLSKLKNQ QSMGKVQIEE LTDRVGKMEQ RQDELLAFIE KAIQNPTFIE HLARRIESFD  240
LSAYNKKRRL PRIENTLQPA VENSVDNLSS SRPESGNIYH QDFTDKLRLE LSPAVSDINL  300
VSHSTQSSNE GGSPQRIILE GDPRETQTPQ RQGGILFTPE PLELSDTGTS FTFKMDSSLH  360
QKSPIGEGPR NLSPREEGEN SISCHLNLTL ASSPLQVEKP TPVKESGLGV SSKSRNHAGN  420
ECPKNNNQGS GPPRGRVNDV FWEQFLTERP GSLDNEEASS NYRTNPYDEQ DDRRSGQGVS  480
KNAKNMERLS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-162	HSF family protein