PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM67482.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | GRAS | ||||||||
Protein Properties | Length: 485aa MW: 55289.4 Da PI: 6.5657 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 299.2 | 1e-91 | 95 | 481 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l++lLl A+av++++ + a + L +l +s +gd++qR++ yf+ +Laarl+ + s ++++ ++ts +ee++a+++++ vsP+++f+h+taN OWM67482.1 95 LIHLLLLTATAVDENNVRPALENLGELYRSVSMTGDSVQRVVVYFADGLAARLLTQKSPFFDTIMKKPTS----EEEFSAFTYLYRVSPYYQFAHFTAN 189 689****************************************************9*****999999996....89999******************** PP GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledle 190 qaIlea+e+e +++H+iDfd+s+G+QWp+++q+L++++ + + slR+Tg+g s eel+et++rL fA+ + ++ fef+ l l + OWM67482.1 190 QAILEAFEREeghnhRALHVIDFDVSYGFQWPSFIQSLSEKATDWAriSLRVTGFGT----SMEELQETESRLVGFANGFkNLVFEFQGL----LRGSQ 280 ********9988887889************************6533359********....*****************98579******8....66677 PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289 + +Lr k++E++aVnlv++l +l +s + ++e+Lk + +P v+++veqe ++++ sFl rf+e+l+y++a+fdsl+ lp es+er ++E+ OWM67482.1 281 IINLRKKKQETVAVNLVFHLNTLN-SSSK----ISETLKSIHAFKPSVLTLVEQEGSRSARSFLSRFMESLHYFAAMFDSLDDCLPMESSERLSIEKNH 374 789*****************9996.3333....4569************************************************************** PP GRAS 290 lgreivnvvacega.......errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...ee............sgslv.lgWkdr 365 lg+ei+ ++ ++ + + + e++e+W+ r+e+ GF+ v++s++ +qaklll+ +++ ++ e+ +g ++ lgW++r OWM67482.1 375 LGKEIKWMLNYDKDgdrntdrDNFSKYERMETWKGRMESHGFEGVKMSSRSLMQAKLLLKIRANNYCPLQlegENsnnggfrvierdEGRALsLGWQHR 473 *********8654311111113456789*******************************8766443333322311333333333334444445****** PP GRAS 366 pLvsvSaW 373 L+++SaW OWM67482.1 474 CLITASAW 481 ******** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 485 aa Download sequence |
MTEEEEDQLL NLSLAIVSGC GEEARRTKRR RRDGHVFINL NHVDAHGEGG VLEEGKVFAL 60 LQMREEMLNT TTDSSTSKRK APSVDIHEDG KGLHLIHLLL LTATAVDENN VRPALENLGE 120 LYRSVSMTGD SVQRVVVYFA DGLAARLLTQ KSPFFDTIMK KPTSEEEFSA FTYLYRVSPY 180 YQFAHFTANQ AILEAFEREE GHNHRALHVI DFDVSYGFQW PSFIQSLSEK ATDWARISLR 240 VTGFGTSMEE LQETESRLVG FANGFKNLVF EFQGLLRGSQ IINLRKKKQE TVAVNLVFHL 300 NTLNSSSKIS ETLKSIHAFK PSVLTLVEQE GSRSARSFLS RFMESLHYFA AMFDSLDDCL 360 PMESSERLSI EKNHLGKEIK WMLNYDKDGD RNTDRDNFSK YERMETWKGR MESHGFEGVK 420 MSSRSLMQAK LLLKIRANNY CPLQLEGENS NNGGFRVIER DEGRALSLGW QHRCLITASA 480 WHSVN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 33 | RRTKRRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41920.1 | 3e-55 | GRAS family protein |