PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67315.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 451aa MW: 49286.7 Da PI: 4.8421

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	209	263	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fv a++qLGGse+AtPk +l+lm+vkgLt++hvkSHLQkYR+ OWM67315.1 209 KARMRWTPELHESFVAAINQLGGSERATPKGVLKLMNVKGLTIYHVKSHLQKYRT 263 68****************************************************8 PP
2	Myb_DNA-binding	55.9	1e-17	211	262	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v a++qlGg t+k + + m+ kg+t +++ks++qky+ OWM67315.1 211 RMRWTPELHESFVAAINQLGGSeraTPKGVLKLMNvKGLTIYHVKSHLQKYR 262 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MTNRVSSQTA QTFSHGGTSG HLFSPPPGSG NDAYFSAVSY GSQHQSHLPN SPFISNSSID 60 KLPMPLEDST QAGQPAELAN FPEGNREVSW GTDQFQGFLN FSDDVPVQNG QIAQTETTGN 120 VLVSDDHAKR SDWQWADQLM SVEEVLDPNW TELLADVGVD VTEPKEKVLK AFPEAIVQQS 180 QMPQDQNVST PLGEFSPEGN QLSAAPQNKA RMRWTPELHE SFVAAINQLG GSERATPKGV 240 LKLMNVKGLT IYHVKSHLQK YRTARYKPES SEGDDCCPAC SFLCVRPACS FLCVHTGGSS 300 EKKMSAIDEM KSLDLKTSID ITEALRLQIE VQKKLHEQLE IQRNLQLRIE EQGKYLQMMF 360 EKQRKMESEG SKATSSAVAD DTSPSAVQSA SGNDKTGAPD QSSPKLEADP LNPSPEGSSP 420 SVGGKHKLQE ITAEEEGPSS PKRPREDKSI D

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MTNRVSSQTA QTFSHGGTSG HLFSPPPGSG NDAYFSAVSY GSQHQSHLPN SPFISNSSID  60
KLPMPLEDST QAGQPAELAN FPEGNREVSW GTDQFQGFLN FSDDVPVQNG QIAQTETTGN  120
VLVSDDHAKR SDWQWADQLM SVEEVLDPNW TELLADVGVD VTEPKEKVLK AFPEAIVQQS  180
QMPQDQNVST PLGEFSPEGN QLSAAPQNKA RMRWTPELHE SFVAAINQLG GSERATPKGV  240
LKLMNVKGLT IYHVKSHLQK YRTARYKPES SEGDDCCPAC SFLCVRPACS FLCVHTGGSS  300
EKKMSAIDEM KSLDLKTSID ITEALRLQIE VQKKLHEQLE IQRNLQLRIE EQGKYLQMMF  360
EKQRKMESEG SKATSSAVAD DTSPSAVQSA SGNDKTGAPD QSSPKLEADP LNPSPEGSSP  420
SVGGKHKLQE ITAEEEGPSS PKRPREDKSI D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.1	1e-89	G2-like family protein