PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66634.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 889aa MW: 98112.8 Da PI: 5.889

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.6	5.5e-19	302	402	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++lv++ OWM66634.1 302 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGVPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLCAGDTVIFSRIN-PGGKLVMG 398 99************************666778999***********99899999999.*******************887.78888888 PP EE-S CS B3 96 vfrk 99 ++++ OWM66634.1 399 FRKA 402 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 889 aa Download sequence
MEPKICVNAS CRTTSVHEWR KGWPLESGKF VDLCDQCGSA YDKCVFCETF HLEESGWREC 60 NYCDKRIHCG CIVSRSFFEL MDYGGIRCTG CPKSAQLHTP PSTRDRGEDE DKSVHLYKFT 120 ASGENHFSPQ PRNSEPRSLS IKVNQELVHL MGETGINLSN VVCPSMDILS EEDHIRLLEN 180 LKDFNKSLTH SSINISLGDL VGGANLAVPF PTSQQEGSEP NTGPSSFQQG ASSHPILPSL 240 SKPGSAAGAG ASKLTVPQVR VARPPAEGRG KNQLLPRYWP RITDQELEQL SGDLNSTIVP 300 LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQSEGVPVR IQDVKGNEWT FQFRFWPNNN 360 SRMYVLEGVT PCIQSMQLCA GDTVIFSRIN PGGKLVMGFR KASHSMQPQA NGTSSVTPSR 420 VVMENIPVVG GYADLLHPPN GTKDPLPNSP FENLKDTRGN VSWHRNGDIV NRTSEDATQL 480 PPISEKKRTR NIGLKSRRLL MHNEDVMELR LTWEEAQDLL RPPPSVGPSI VTIEGHDFEE 540 YDEPPVFGKR TVYISRSSGD QEQWAQCDDC SKWRRLPIDV LLPPKWACTD NIWDSERRFC 600 SAPDEMTPKE LDGLLRISRD TKKRRLVDNQ NGIGGSVDNE TAGLDALASA AELGESMVVP 660 LGPGEASMGP TTKHPRHRAG CTCIVCIQPP SGKGKHRPTC TCNVCMTVKR RFKTLMLRKK 720 KQRQESEHEQ QADAASTSMH RDSGSQQQMN VASSLVEKSE ERQAGVAAAE NGSSNGQIDL 780 NCDPDREEVE GFDNEAQKRH VNNVNSVTAS GTCFPASCDY PTRTTTSSSF QQEEQQQLLD 840 NEKQHFVQPN EEAVVSIGQK GKSSDGDGHS DDQEAADDEE PPPRPPVDI

Sequence ? help Back to Top

Protein Sequence Length: 889 aa Download sequence

MEPKICVNAS CRTTSVHEWR KGWPLESGKF VDLCDQCGSA YDKCVFCETF HLEESGWREC  60
NYCDKRIHCG CIVSRSFFEL MDYGGIRCTG CPKSAQLHTP PSTRDRGEDE DKSVHLYKFT  120
ASGENHFSPQ PRNSEPRSLS IKVNQELVHL MGETGINLSN VVCPSMDILS EEDHIRLLEN  180
LKDFNKSLTH SSINISLGDL VGGANLAVPF PTSQQEGSEP NTGPSSFQQG ASSHPILPSL  240
SKPGSAAGAG ASKLTVPQVR VARPPAEGRG KNQLLPRYWP RITDQELEQL SGDLNSTIVP  300
LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQSEGVPVR IQDVKGNEWT FQFRFWPNNN  360
SRMYVLEGVT PCIQSMQLCA GDTVIFSRIN PGGKLVMGFR KASHSMQPQA NGTSSVTPSR  420
VVMENIPVVG GYADLLHPPN GTKDPLPNSP FENLKDTRGN VSWHRNGDIV NRTSEDATQL  480
PPISEKKRTR NIGLKSRRLL MHNEDVMELR LTWEEAQDLL RPPPSVGPSI VTIEGHDFEE  540
YDEPPVFGKR TVYISRSSGD QEQWAQCDDC SKWRRLPIDV LLPPKWACTD NIWDSERRFC  600
SAPDEMTPKE LDGLLRISRD TKKRRLVDNQ NGIGGSVDNE TAGLDALASA AELGESMVVP  660
LGPGEASMGP TTKHPRHRAG CTCIVCIQPP SGKGKHRPTC TCNVCMTVKR RFKTLMLRKK  720
KQRQESEHEQ QADAASTSMH RDSGSQQQMN VASSLVEKSE ERQAGVAAAE NGSSNGQIDL  780
NCDPDREEVE GFDNEAQKRH VNNVNSVTAS GTCFPASCDY PTRTTTSSSF QQEEQQQLLD  840
NEKQHFVQPN EEAVVSIGQK GKSSDGDGHS DDQEAADDEE PPPRPPVDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	709	720	KRRFKTLMLRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein