PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66437.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WOX
Protein Properties Length: 311aa    MW: 34033.3 Da    PI: 6.4435
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.7e-203697257
                T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                ++R+t+t+eq+++L++l+++   r psa+++++++++l    +++ ++V++WFqN++a+e++
  OWM66437.1 36 STRWTPTTEQIRILKDLYYNygVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 97
                58*****************878**************************************97 PP
2Wus_type_Homeobox113.79.6e-373599265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt+eQi+iL++ly+  G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
         OWM66437.1 35 SSTRWTPTTEQIRILKDLYYnYGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 99
                       789***************9868*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEQPQQHHQQ LNEDANGGSK GGGGGGGSSL LCRQSSTRWT PTTEQIRILK DLYYNYGVRS  60
PSADQIQRIS ARLRQYGKIE GKNVFYWFQN HKARERQKKR FVPDHHPNPN PLHHLPAAAN  120
SFGPSAESKL GDLPVHHDNK YPNFGSAIGL PSSSSSAATP AGLVAFGQMA NYGYGSTATM  180
EKNFRNCSIS SSCGGGGSPG VGGSMSHNFG WIAVDPYPYS SRSIFDKQGC NVNEEHDEQE  240
EEEEDEERNS AREIETLPLF PMHDNINGFC GIKHNTDGGP GIWYDDVFMG SSRTSLELSL  300
NSYTAMSPSS P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-39WOX family protein