PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66413.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family SRS
Protein Properties Length: 338aa    MW: 37241.9 Da    PI: 6.5488
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702203.18e-631302744154
      DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelet 102
                 g++ CqdCGnqakkdCah+RCRtCCksrgfdC thv+stWvpa+krrerq+ql+++++ +  s ++a ++r+r+    + ++l+s+    ++ ++ le+
  OWM66413.1 130 GGICCQDCGNQAKKDCAHQRCRTCCKSRGFDCPTHVRSTWVPASKRRERQHQLQQQHQLH-LSPSHALPRRHRDG---TGTSLASA----QHDQSGLEV 220
                 7789*********************************************99998864433.33455666666653...33444333....345668999 PP

      DUF702 103 sslPeevsseavfrcvrvssvddgeee..laYqtavsigGhvfkGiLydqGlee 154
                  ++P+e++s+a+frcvrvss d+ge++  +aYqtav+i+GhvfkGiLydqG+e+
  OWM66413.1 221 GDFPAELNSPAMFRCVRVSSSDEGEDQeqYAYQTAVNISGHVFKGILYDQGPEN 274
                 **********************9655445***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLLPFFFFFF FFFFFVCFSL HSIGGRRGRS SDYSSASYNN PPGGDEEDEQ HHPPHHQVPP  60
REISFWYDRP DYSHHGDYVE QQQQQQQLDL YNYSSSSRRR AGSMDADDST RMMMMMSGGM  120
SRGSAGGAGG GICCQDCGNQ AKKDCAHQRC RTCCKSRGFD CPTHVRSTWV PASKRRERQH  180
QLQQQHQLHL SPSHALPRRH RDGTGTSLAS AQHDQSGLEV GDFPAELNSP AMFRCVRVSS  240
SDEGEDQEQY AYQTAVNISG HVFKGILYDQ GPENTPGDVA PGESSSGGGS GGVTQPLTLG  300
GAAESGGAEA APLFDPYSSM YPPPYSMAGT QFFPHPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.13e-53SRS family protein