PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM66376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB_related | ||||||||
Protein Properties | Length: 88aa MW: 10185.4 Da PI: 4.861 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.6 | 1.4e-08 | 17 | 60 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WTte +l+ +a + + + +W Ia+ +g g + +++k ++ OWM66376.1 17 TWTTEQNKLFENALAVHDREtpnRWQDIAKAVG-GTSVNEVKRWY 60 7*****************88*************.********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MVTTMESELV SSSDSRTWTT EQNKLFENAL AVHDRETPNR WQDIAKAVGG TSVNEVKRWY 60 EILQRDIELI ESDKIPIPKY RTSSESKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 5e-27 | MYB_related family protein |