PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66305.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 441aa MW: 49688.3 Da PI: 10.0291

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.1	6.8e-18	24	119	2	100
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100 fk+ + + + +sg l++p kf++++g + +s + l +sg Wevkl r ++g+++l++GW +F + +k gDf+vF +++rs+ e+ v +f+ks OWM66305.1 24 FKIIL-HTMIQSGKLTIPQKFVRKYGAELSKSDVVLLHVPSGDAWEVKL--RAGDGAIWLENGWPDFMNFYSIKHGDFLVFCYKSRSSNEFDVLLFDKS 119 55553.45667788*********77766775666666******..*****************************999999**99985 PP
2	B3	58.7	1e-18	164	265	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-....TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt....kGWkeFvkangLkegDfvvFkldgr.sefelvv 94 f+ v+ p +v+ s l +p kf+++h g++ ++ +l+l+ + ++W+vk+ + + ++++l GWk Fv +ngL +gD++vF++++ ++++++v OWM66305.1 164 FLVVMQPYYVHPSYKLHVPVKFLQTHIGENGSGGELKLRVSGEKVWTVKY--NISVRGTWLHakvvPGWKAFVVDNGLVVGDVCVFEFIRGlKSTSFRV 260 677888999999999*********66678888************..555555555444559******************999*** PP EEE-S CS B3 95 kvfrk 99 ++fr+ OWM66305.1 261 TIFRA 265 *97 PP
3	B3	41.8	1.9e-13	338	431	2	95
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+v +++++l++ l +p f+++h +++ +++t l+ +rsW k+i+ + + r v++ G F+k+n Lk++D+++F+l++r e ++v+ OWM66305.1 338 FQVVMTKSYLSHWKLNIPSGFVRDHlNLE-SKEQTAALK-VGNRSWPTKVIIsCPSLPRAVFSCGFHAFAKENTLKARDICTFELIQRAEIVFRVS 431 56677888888888*********7333.344455544.578***877999999*************************9766545555 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MASRTPQMEY EQSSSFHLKA PHFFKIILHT MIQSGKLTIP QKFVRKYGAE LSKSDVVLLH 60 VPSGDAWEVK LRAGDGAIWL ENGWPDFMNF YSIKHGDFLV FCYKSRSSNE FDVLLFDKSA 120 TEIEYPIKNY TTDENNVCPK ALKGAERVKA LERAKSFKSS NPYFLVVMQP YYVHPSYKLH 180 VPVKFLQTHI GENGSGGELK LRVSGEKVWT VKYNISVRGT WLHAKVVPGW KAFVVDNGLV 240 VGDVCVFEFI RGLKSTSFRV TIFRAPPPAI SCALPLQASG GGGAASSEHE GCSGAKFKGK 300 EKTPSSDMKQ VRVNNQNITR CFDFRPGASL FTSEYPYFQV VMTKSYLSHW KLNIPSGFVR 360 DHLNLESKEQ TAALKVGNRS WPTKVIISCP SLPRAVFSCG FHAFAKENTL KARDICTFEL 420 IQRAEIVFRV SINRVKKDQK K

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MASRTPQMEY EQSSSFHLKA PHFFKIILHT MIQSGKLTIP QKFVRKYGAE LSKSDVVLLH  60
VPSGDAWEVK LRAGDGAIWL ENGWPDFMNF YSIKHGDFLV FCYKSRSSNE FDVLLFDKSA  120
TEIEYPIKNY TTDENNVCPK ALKGAERVKA LERAKSFKSS NPYFLVVMQP YYVHPSYKLH  180
VPVKFLQTHI GENGSGGELK LRVSGEKVWT VKYNISVRGT WLHAKVVPGW KAFVVDNGLV  240
VGDVCVFEFI RGLKSTSFRV TIFRAPPPAI SCALPLQASG GGGAASSEHE GCSGAKFKGK  300
EKTPSSDMKQ VRVNNQNITR CFDFRPGASL FTSEYPYFQV VMTKSYLSHW KLNIPSGFVR  360
DHLNLESKEQ TAALKVGNRS WPTKVIISCP SLPRAVFSCG FHAFAKENTL KARDICTFEL  420
IQRAEIVFRV SINRVKKDQK K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-20	B3 family protein