PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66304.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 338aa    MW: 38207.9 Da    PI: 10.3257
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.73.7e-1721115299
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 fk+ ++  + ++g lv+pkkf++++g++   s  + l+ +sg  Wev+l  rk++  ++l+kGW +F++   +k g f+vFk++  s+  ++v vf+k
  OWM66304.1  21 FKIVLQ-ETIRTGKLVVPKKFVRKYGKDLSVSSVVLLKVPSGDAWEVEL--RKGDTDVWLQKGWLDFANFYSIKHGHFLVFKYEAGSSNVFNVFVFDK 115
                 555544.4556677***********77766777888999**********..********************************977777678888876 PP
2B348.31.8e-15240335598
                 -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +++  l++g l +  +f++e+ ++k ++++ +tl+   + rsW+++li   + + + ++++G   F k+n Lk+gD+++F+l+gr e  ++v++ r
  OWM66304.1 240 VMTKGCLSKGYLKIATTFMKENiDLK-HKKQRVTLKAdHEDRSWTITLITgLNPRPWAMFSGGFMAFLKENSLKAGDVCTFELIGRAEMVFRVSISR 335
                 56788899999***********8444.44457888773677*******987555557***************************9866656776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MEDDIAHHIS SFFHPAAPHF FKIVLQETIR TGKLVVPKKF VRKYGKDLSV SSVVLLKVPS  60
GDAWEVELRK GDTDVWLQKG WLDFANFYSI KHGHFLVFKY EAGSSNVFNV FVFDKSATEI  120
EYPVRSKVTL SSIKVENIDE DSDNIPVKKR NTRPISGIMT RSRTRLTGHS RMPENGRRAS  180
GGGATRSKLE WCSGAAAEDR GNNSSLDVTK AKERQKIVQD FEFQPVNGFV PGQHPVFQMV  240
MTKGCLSKGY LKIATTFMKE NIDLKHKKQR VTLKADHEDR SWTITLITGL NPRPWAMFSG  300
GFMAFLKENS LKAGDVCTFE LIGRAEMVFR VSISRVKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-27B3 family protein