PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66204.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

AP2

Protein Properties

Length: 494aa MW: 53566.7 Da PI: 6.591

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.9	8.1e-16	322	373	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OWM66204.1 322 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 373 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MESLTTSSPP LATASAASHL LPFDHLASAP QLLFDNNFYA HGLNNFANKP QILFPEPSVH 60 DHHQFPNPTI PKLEDFFGDS QTETQDSSSL THIYEPTGPA YFSDQTDLKA IAGAFQSFSA 120 NSGSEVDDSG SMSRASQAPH QLADFACHTV DSGGHEMGGF SSAAPTAVPL SLAVADTAKN 180 TAISTDSDCS KKVADTFGQR TSIYRGVTRS AAISVPVWLV LLSLFSILGS TSGVPPPFCI 240 QSETALLTRP IPQRRQLGGY DKEDKAARAY DLAALKYWGP TATTNFPVSS YTKELEEMKH 300 VTKQEFIASL RRKSSGFSRG ASIYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFATEEEA 360 AEAYDIAAIK FRGVNAVTNF EMNRYDVEAI SNSTLPIGGA AKRLKLTLET DQKPPALAHL 420 DHHHQGPQAN VSTNINFGAF QHHTIPGIPF EAGPLYSSSN FHQLQSNMGI PCSSIPSFMV 480 PQAGEFFLWP NQNC

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MESLTTSSPP LATASAASHL LPFDHLASAP QLLFDNNFYA HGLNNFANKP QILFPEPSVH  60
DHHQFPNPTI PKLEDFFGDS QTETQDSSSL THIYEPTGPA YFSDQTDLKA IAGAFQSFSA  120
NSGSEVDDSG SMSRASQAPH QLADFACHTV DSGGHEMGGF SSAAPTAVPL SLAVADTAKN  180
TAISTDSDCS KKVADTFGQR TSIYRGVTRS AAISVPVWLV LLSLFSILGS TSGVPPPFCI  240
QSETALLTRP IPQRRQLGGY DKEDKAARAY DLAALKYWGP TATTNFPVSS YTKELEEMKH  300
VTKQEFIASL RRKSSGFSRG ASIYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFATEEEA  360
AEAYDIAAIK FRGVNAVTNF EMNRYDVEAI SNSTLPIGGA AKRLKLTLET DQKPPALAHL  420
DHHHQGPQAN VSTNINFGAF QHHTIPGIPF EAGPLYSSSN FHQLQSNMGI PCSSIPSFMV  480
PQAGEFFLWP NQNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	1e-121	AP2 family protein