PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66147.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 282aa MW: 31368.8 Da PI: 8.3191

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.6	1.1e-13	106	152	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P++ kK++Ka++L Av+YIk+Lq OWM66147.1 106 DHVIAERKRREKLSQRFIALSAVVPSL-----KKMDKATVLGDAVKYIKQLQ 152 6999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MNPSFGDYSL NLDDLDFPSF SLKNYSLNHE AAPNFSASSV ETLQPSTKRA AKQLKMSPSS 60 SPFQIISLGN SGSPPRENIK DISKQESYSN KRGHGAMSRT PLHAQDHVIA ERKRREKLSQ 120 RFIALSAVVP SLKKMDKATV LGDAVKYIKQ LQGRSEKLEE ELSRKTVESV VVVKKSQVAM 180 DDYSSTSDES SCDQPNQELP EIEARVSEKH VLVKVHCERR QGCISKILNL IEKTNLIVLS 240 NSVIPFGSSI LDITIVAQME GELPMTIEDL VKNLCRNLLN LI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	116	ERKRRE
2	112	117	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-49	bHLH family protein