PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM66001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB_related | ||||||||
Protein Properties | Length: 194aa MW: 22789.7 Da PI: 5.0696 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.1 | 5.3e-10 | 25 | 70 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W +eE+ ++++ + G g+Wk++a+ +Rt q++s+ qky OWM66001.1 25 GAWNQEEHRNFLRGLYKCGWGNWKLVAQNYVRTRTQWQIVSHAQKY 70 89*****************************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MEGYQIPNQS MRPQWLTQQE NKREGAWNQE EHRNFLRGLY KCGWGNWKLV AQNYVRTRTQ 60 WQIVSHAQKY QLRYYETEKK RRSIHDTTLE DEHGNLLPLP VPPWPTVKDT APAVLLPPNG 120 QLPQNLQGAL NQLELDEVVR KHVEVLLSDY SIDEIEININ DFLPPDDLLL NPSYLFSSFF 180 FAFPELGPCE FHTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 3e-19 | MYB_related family protein |