PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65693.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GRF

Protein Properties

Length: 496aa MW: 53153.3 Da PI: 6.5728

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.1	6.2e-23	169	213	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+++grCrRtDGKkWRC r++++++k+C++H++rgr+rsrk++e OWM65693.1 169 DPDVGRCRRTDGKKWRCTREAVADQKYCDKHINRGRHRSRKPVEG 213 799***************************************985 PP
2	QLQ	56.6	7.8e-20	99	135	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++F+++Q+ +L++Q+l+yKyL+an PvP++Ll ++++ OWM65693.1 99 GPFSPSQWIELEHQALIYKYLNANIPVPSNLLIPLRR 135 59*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MDGGVVGMES FSFEPGQFSA FEAKSKGFGS EPPEEQQWRA TKVLRADDGL SVTKSTTPLH 60 HGTPLMRSER MLSFASLRPE VTLLTKDAAG YGSFAGFRGP FSPSQWIELE HQALIYKYLN 120 ANIPVPSNLL IPLRRSFNPY GPSGSSAGSL HPNSLGWGSF HLGSSGSTDP DVGRCRRTDG 180 KKWRCTREAV ADQKYCDKHI NRGRHRSRKP VEGQITGHAA AASGPANPKM VSVASSSSAL 240 VVGPTGGGLN NVFPPRQNEF DRMLDPRAHN LSVKSSTVSL KSDEQTAFTL LPDQEIPVED 300 SMQTEFGLVS SSSLINPSQT KSYVSFLDFA DPDASNHQQP LHQFVDNWPK AQLDSPIITW 360 PEDLKSDWTQ LSMSIPMASS DISSSSSSPL RLSHELDPVQ VGLGKSSDLL GTKSLKQSSC 420 APNSWGSPLG GPLGEVLINT SIGSSPTGVL QQNASFGSLS NSSSASSPIA QNTMVHESLS 480 FCDDVFCPTI AAIPST

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MDGGVVGMES FSFEPGQFSA FEAKSKGFGS EPPEEQQWRA TKVLRADDGL SVTKSTTPLH  60
HGTPLMRSER MLSFASLRPE VTLLTKDAAG YGSFAGFRGP FSPSQWIELE HQALIYKYLN  120
ANIPVPSNLL IPLRRSFNPY GPSGSSAGSL HPNSLGWGSF HLGSSGSTDP DVGRCRRTDG  180
KKWRCTREAV ADQKYCDKHI NRGRHRSRKP VEGQITGHAA AASGPANPKM VSVASSSSAL  240
VVGPTGGGLN NVFPPRQNEF DRMLDPRAHN LSVKSSTVSL KSDEQTAFTL LPDQEIPVED  300
SMQTEFGLVS SSSLINPSQT KSYVSFLDFA DPDASNHQQP LHQFVDNWPK AQLDSPIITW  360
PEDLKSDWTQ LSMSIPMASS DISSSSSSPL RLSHELDPVQ VGLGKSSDLL GTKSLKQSSC  420
APNSWGSPLG GPLGEVLINT SIGSSPTGVL QQNASFGSLS NSSSASSPIA QNTMVHESLS  480
FCDDVFCPTI AAIPST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	4e-73	GRF family protein