PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM65441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB_related | ||||||||
Protein Properties | Length: 243aa MW: 27476.9 Da PI: 7.9426 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.2 | 1.8e-18 | 191 | 237 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++v+q+G + W+ Ia++++ gR +kqc++rw+++l OWM65441.1 191 KGQWTIEEDRLLVRLVEQFGVRKWSHIAQMLP-GRIGKQCRERWHNHL 237 799*****************************.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEHSSKLVEN LTSSQSLLLS DHFDHYQKSQ SKIVETRSGT MHEFHGLDQL QVANISSPVP 60 PFRAMQNPLL PEIPPENYGF NGTTIDLDFY ENKPYVDTYG GGHGQVMDNF QGGGYLGNFT 120 ERTGSCMAGQ YFNCQLDVKP MSFVAPDEIS CISAENGYSY QNQYGTSKAR ALASSTARRA 180 CKSRTKSHVV KGQWTIEEDR LLVRLVEQFG VRKWSHIAQM LPGRIGKQCR ERWHNHLRPD 240 IKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 3e-37 | MYB family protein |