PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65291.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 455aa MW: 49870.3 Da PI: 6.0283

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.1	5.2e-40	126	185	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s OWM65291.1 126 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSS 185 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MLESKDPAIK LFGRQIPLSS AEASADDLPS SAEIDSAEKQ RQQGEEDDEE DKDKGFDRPV 60 EKSVESMQQD DDPGPLGQEP EKPEGCLDSD NPKTPSIDEE AAKPSSQKEQ TCKPASGENQ 120 KAPKKPDKIL PCPRCNSMDT KFCYYNNYNV NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR 180 KNKSSALHNF RLAQLPLQAA RVDAPNGTHG IPNSKGNGTV LRFGVDAPSY DSVAYLHDEN 240 KVLNGTRNGF HNFEGSNYDN CTTGSSVTVS SSLDEGTGTS QKEQQPMCNL NGFIPQVPCL 300 PLPYPWNIPA APGIFPPGFS IPYYSPVDYW NRTSLHGAWN VPWVFHQEEK SQSWGSDSPT 360 LGKHAREEKE HGDPEQKNGC VLVPKTLRVT NPTEAAKSTI WSIPGIKNDS ISSKGGLFTA 420 FQSKGEDKCR VPETSPVLCA NPAALSRSIK FHESS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MLESKDPAIK LFGRQIPLSS AEASADDLPS SAEIDSAEKQ RQQGEEDDEE DKDKGFDRPV  60
EKSVESMQQD DDPGPLGQEP EKPEGCLDSD NPKTPSIDEE AAKPSSQKEQ TCKPASGENQ  120
KAPKKPDKIL PCPRCNSMDT KFCYYNNYNV NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR  180
KNKSSALHNF RLAQLPLQAA RVDAPNGTHG IPNSKGNGTV LRFGVDAPSY DSVAYLHDEN  240
KVLNGTRNGF HNFEGSNYDN CTTGSSVTVS SSLDEGTGTS QKEQQPMCNL NGFIPQVPCL  300
PLPYPWNIPA APGIFPPGFS IPYYSPVDYW NRTSLHGAWN VPWVFHQEEK SQSWGSDSPT  360
LGKHAREEKE HGDPEQKNGC VLVPKTLRVT NPTEAAKSTI WSIPGIKNDS ISSKGGLFTA  420
FQSKGEDKCR VPETSPVLCA NPAALSRSIK FHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	5e-85	Dof family protein