PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM64896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | GATA | ||||||||
Protein Properties | Length: 248aa MW: 27123.1 Da PI: 5.9413 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 56.3 | 4.3e-18 | 161 | 195 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + +Tp+WR gp+g+ktLCnaCG++y++ +l OWM64896.1 161 CTHCASESTPQWRTGPQGPKTLCNACGVRYKSGRL 195 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDVYGMSSST PDHVFRIDDL LDLSNGDLFS STLSAASTSD DSLNALSTTA PPPPPPPPLP 60 DLSFSFSSSS SPAAPIFPDD FSFTPSDDVF ELEWVSRFVD DSLSDVVIPA NSVAGTLAVR 120 PDATAFSGKP RTKRSRPVCG NGKLTEENSA DAGVEAAVRR CTHCASESTP QWRTGPQGPK 180 TLCNACGVRY KSGRLVPEYR PAASPTFVLT QHSNSHRKVM ELRRQKELSR QEQHYRYQQQ 240 QQHDFQVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60530.1 | 2e-57 | GATA family protein |