PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64871.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 296aa MW: 33171.3 Da PI: 7.1525

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.4	7.7e-14	12	57	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde+l++ v+++G+++W++I ++ + Rt+k+c++rw + OWM64871.1 12 KGPWKAEEDEILLNHVRRYGPRDWSSIRSKGLLQRTGKSCRLRWVN 57 79***********************8887799********87 PP
2	Myb_DNA-binding	47.7	3.5e-15	68	107	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++T+eE+ + +++ +q+G++ W++Ia +++ gRt++++k++w OWM64871.1 68 KFTPEEERIVIELQAQFGNK-WARIATYLP-GRTDNDVKNFW 107 79****************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MNRSTSKDEI RKGPWKAEED EILLNHVRRY GPRDWSSIRS KGLLQRTGKS CRLRWVNKLR 60 PNLKNGCKFT PEEERIVIEL QAQFGNKWAR IATYLPGRTD NDVKNFWSSR QKRLARILQT 120 SAASSSSSSS KSLRTKRNVP VRRNTVPSME IATLPFFGEE PEQPCPKPQR RSAEDSETLK 180 AASLPELEIP NSLNDNPICA NSQELFPPIL QAPEAGMTFL PGGNDFLGRL EDSNLFDAFE 240 PIGAVSGIGE ADQFPGELPF FELSGGFRTS NLDTFFDDFP TDMLDDVGSP ASPPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	6e-77	MYB family protein