PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64791.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 279aa    MW: 28505.4 Da    PI: 7.371
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00018103125123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC  Cgk F++   L  H  +H
  OWM64791.1 103 YKCAVCGKAFPSYQALGGHKASH 125
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MALEALNSPT HTAAAPPFYV DDHHHRHREL WAKAKRSKRS RSESGSPANP AASDDPVASP  60
SEEEYLALCL IMLARSGSGS ASASASASAS ERPPEPPALK LSYKCAVCGK AFPSYQALGG  120
HKASHRKSSA AAASADVPAD SSNPTAATTS SSSGSGKAHE CSICHKTFPT GQALGGHKRC  180
HYDGGSGSSA GASSSSGAVG GSGSRSTSGH VHLDLDLNLP APGEFSAEEQ MIISRKDQGQ  240
SQLPAGGEQE VESPLPTKKP RLFLVGDDMG CPPPQGSIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-29C2H2 family protein