PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64700.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 332aa MW: 34629.2 Da PI: 6.8042

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	30.5	1.2e-09	87	128	42	74
TCP 42 dkdsktieWLlqqakpaikeltgtssssasec.........e 74 +++ kti WLl+ a+pai+++tgt++++a ++ + OWM64700.1 87 KRATKTIRWLLEHAEPAIIAATGTGTIPAIAMsingtlkipT 128 7899********************999994442222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MASATQKQEV EDNDKDTGTN GCADERSEGN NSDDQRKNEQ PPPRTAIALK DEPVNGEAET 60 PMPPPLRAVP AAAATISHAQ LVVAQPKRAT KTIRWLLEHA EPAIIAATGT GTIPAIAMSI 120 NGTLKIPTTT TAVTATTTVG KEPKVVDLTA AKKKRKQPAD SDYIDVNKTV TANNLSVDLP 180 LTAQQQHHQQ LVPPQDLVPA MWAMPITSTG IMPAGTYFVL PNQPHLVTFP VPASATPVVG 240 VAAAVASTRS IASLVSATGV TVAAVQTVGQ TAQSVGGLNS KASGSKLAND ASVMAPSSAV 300 TTGPAQTLRE FSLEIYDKEE LQLMSRSSVS KH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	4e-13	TCP family protein