PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64609.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 359aa    MW: 41011 Da    PI: 9.6696
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.94.6e-10225330281
                 EEE-..-HHHHT.T-EE--HHH.HTT.---..--SEEEEEETTS.......................-EEEEEE..EEETTEEEE-TT.HHHHHHHHT- CS
          B3   2 fkvltpsdvlks.grlvlpkkfaeeh.ggkkeesktltledesg.......................rsWevkliyrkksgryvltkG.WkeFvkangL 74 
                 +k+lt+sdv ++ +rl l+kk + +   + +ee+  ++l  ++g                       r+W +k +  k s +yvlt+G W +Fv++n+L
  OWM64609.1 225 QKELTSSDVARHyKRLLLSKKNILSLnFLREEEKEIVKLPATKGdiekrgipvqvigpsrhmhelsfRRWHMKKKNGKVSIMYVLTTGvWTDFVEDNNL 323
                 7899999999999899999998877774444444456666666666666666666666669999999*******766777779999888********** PP

                 -TT-EEE CS
          B3  75 kegDfvv 81 
                 kegD+v 
  OWM64609.1 324 KEGDVVQ 330
                 ****984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MADGMEQEKE TKNLADRCSQ MNGESDKAAP CLEDMMGRGH ENMTVTEELL EVVKVASKKL  60
VAEPLGVPSR TVQTPRFDVR REMPFGTCRP VEKPEWVRSH KDGESAYQKN QVPKTFVLPH  120
WQGQRPRSLR VEVPFGPHSC HEAGESSTKL EQPLGIQASG KVKEVRESST RGKKRPMAGR  180
LKQPRPLKKP KEEGPTPFDP VEMPREWKDW IEREQRGTDI TPVCQKELTS SDVARHYKRL  240
LLSKKNILSL NFLREEEKEI VKLPATKGDI EKRGIPVQVI GPSRHMHELS FRRWHMKKKN  300
GKVSIMYVLT TGVWTDFVED NNLKEGDVVQ VWSFRVGEEL YMAIVAVRRS TLPEEGGNT