PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64543.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 275aa    MW: 30515.5 Da    PI: 9.9139
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.61.6e-291810130112
         NAM  30 leevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgr 112
                  + ++ +vd++k+ePwdLp k+k +ekewyfFs+rd+ky+tg r+nratk+gyWk+tgkdke++++ ++el+g+kktLvf   +
  OWM64543.1  18 GAAALVDVDLNKCEPWDLPGKAKIGEKEWYFFSHRDRKYPTGVRTNRATKTGYWKTTGKDKEIFNSiTSELIGMKKTLVFLPRE 101
                 335699*************99999*****************************************999999*********9433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MLRSLQSSKS ISHPNSTGAA ALVDVDLNKC EPWDLPGKAK IGEKEWYFFS HRDRKYPTGV  60
RTNRATKTGY WKTTGKDKEI FNSITSELIG MKKTLVFLPR ESSTRREDQL GHARVRPSFQ  120
AHFPLCQGNM SSAFRPRLQS DILQHQTRKI GTEEWVICRV FQKSGTPKKC NPSYELGIGA  180
LIKNSESFVL GSSSFGGLKT NTTVELGAMI PALKLPQNPT LSNAAASSNF TGSPFDAEMG  240
NVEEPNIANN GQSNGRLGFE HSVDLHTYWT SFLLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-46NAC family protein