PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64498.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 305aa MW: 34579.7 Da PI: 8.7846

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.2	2.2e-19	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v+ +G g W+++ar g++R++k+c++rw +yl OWM64498.1 36 KGPWTPEEDKLLSEYVNSHGEGKWSSVARSSGLNRSGKSCRLRWVNYL 83 79********************************************97 PP
2	Myb_DNA-binding	51.5	2.3e-16	89	133	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ OWM64498.1 89 RGQITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 133 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MLNMAAMMGW RSSSSSPSSP SSVHEISLQL GAGWRKGPWT PEEDKLLSEY VNSHGEGKWS 60 SVARSSGLNR SGKSCRLRWV NYLRPGLKRG QITPQEEGII IELHALWGNK WSTIARYLPG 120 RTDNEIKNYW RTHFKKKPDK TSHHLKREKQ KAQATLHKRM IFRHQQQQQQ KQRDPLPNID 180 LHADNYRQVR DNRGIGEDHK ERDPAGPWDP MVEDKCCPVV LSQSQQDQTA ASWPEFIGED 240 ELWGSGLWNL DVVGLQQGHV DHTTNCNKMA MQNQANTIAN NSGAGVFACA GDANGFCNSG 300 DYYIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	9e-69	MYB family protein