PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64271.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 336aa    MW: 36747.2 Da    PI: 9.7166
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-1370114147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       OWM64271.1  70 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 114
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MVSVNPHPAQ GFYFFDPMMN SMGLSGINSA PPPSSANPAS AAPAPTPSSA PFSEDPSKKV  60
RKPYTITKSR ESWTEQEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK  120
SGTSEHVPPP RPKRKAAHPY PQKAPRNAIS SQVNGPFQSS STLFEPGYAV RPEGASVLGN  180
PASNVSLSSW SYNSSPAVNL SQATKDDARI GGSVVPGCYS SSNENMPKSS SNAQIINRDN  240
EPNARVMPDF AQVYRFIGSV FDPNASGQLQ RLKQMDPINL ETALLLMRNL CANLKSPEFE  300
EQRKLLASYN EDPDRARASD PFSLRAGKSE SAILSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.21e-83MYB_related family protein