PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64241.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 642aa MW: 72560.7 Da PI: 4.9899

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.9	4.9e-05	453	486	17	55
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N++f Lr+++P+ + ++Ka+iL ++ Y+k+L+ OWM64241.1 453 NEKFLLLRSMVPSiN------EVDKASILNDTILYLKELE 486 99*********77......8*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MNDKMANGIG THEGVPENMR KQLAVAVRSI QWSYAIFWSL STTRQGVLQW GDGFYNGDIK 60 TRKTVQEGEL ISDKFGLQRS EQLRQLYIAL QEGESENQQS KRPSASLSPE DLTDEEWYYL 120 VCMSFVFNPG EGLAGRALAN GNTIWLCNAQ HADSKVFPRS LLAKSASIQT VVCFPYLGGV 180 IELGVTELVQ EDPSLLQHIK VALLNFSKPL CSDKSSLVPQ NGDHERDPMT MKIDDNIVDN 240 LVFENLFSST ERIDIEERPT EPNGNVQMEL TADSPDECSN GCEHNHETED SFMVEGINGE 300 SWHFFEDDFS NGFQCSMNSS DCISEAIVNP ENTNLESSKS LHLKELQECN HSKLSSLDLG 360 HDGDVSHYQK TISTIIRNSQ PSNETQILRR CCGCKSSFAS WKMFEGHRFP QEQQKILKGI 420 LFKVPLMYEH SLSKNQQEQS ARGCVLSVKR KENEKFLLLR SMVPSINEVD KASILNDTIL 480 YLKELETRVE ELESCMDSTD FKGRPARRKF PDLGEQISDN YENRKFSDGK KQSLITKRKA 540 SDIDETENPE FNRALPTEGQ PLDLKVHIKD REVHIEMRCP YREYLLLDIM EVINNLHLDA 600 HSIQSSTSDG VLTLTLESKF RGAAISPAGM IKQALRKIMG SC

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MNDKMANGIG THEGVPENMR KQLAVAVRSI QWSYAIFWSL STTRQGVLQW GDGFYNGDIK  60
TRKTVQEGEL ISDKFGLQRS EQLRQLYIAL QEGESENQQS KRPSASLSPE DLTDEEWYYL  120
VCMSFVFNPG EGLAGRALAN GNTIWLCNAQ HADSKVFPRS LLAKSASIQT VVCFPYLGGV  180
IELGVTELVQ EDPSLLQHIK VALLNFSKPL CSDKSSLVPQ NGDHERDPMT MKIDDNIVDN  240
LVFENLFSST ERIDIEERPT EPNGNVQMEL TADSPDECSN GCEHNHETED SFMVEGINGE  300
SWHFFEDDFS NGFQCSMNSS DCISEAIVNP ENTNLESSKS LHLKELQECN HSKLSSLDLG  360
HDGDVSHYQK TISTIIRNSQ PSNETQILRR CCGCKSSFAS WKMFEGHRFP QEQQKILKGI  420
LFKVPLMYEH SLSKNQQEQS ARGCVLSVKR KENEKFLLLR SMVPSINEVD KASILNDTIL  480
YLKELETRVE ELESCMDSTD FKGRPARRKF PDLGEQISDN YENRKFSDGK KQSLITKRKA  540
SDIDETENPE FNRALPTEGQ PLDLKVHIKD REVHIEMRCP YREYLLLDIM EVINNLHLDA  600
HSIQSSTSDG VLTLTLESKF RGAAISPAGM IKQALRKIMG SC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-158	bHLH family protein