PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63943.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 563aa    MW: 63238.6 Da    PI: 4.6253
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS435.83.1e-1331885631374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA a+s+g+  +a++++++++ ++s +gdp qR+aay++e+Laar+a s++ +yk+l+++e +   s ++laa+++++e++P++kf++++aN
  OWM63943.1 188 LKQLLVDCAAALSEGNVIEASTMIEEVRRTVSIQGDPPQRIAAYMVEGLAARMAASGKYIYKSLKCKEPP---SLDRLAAMQILFEICPCFKFGFMAAN 283
                 689******************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                  aI ea++ e+ vHiiDfdi+qG Q+++L+q++as      +++p lR+Tgv++pes+      l+++g+rL+k+Ae+lgvpfef + v ++++ ++++
  OWM63943.1 284 GAIIEAFKDEKSVHIIDFDINQGNQYITLIQSIASIYqksnKSKPVLRLTGVDDPESVqrPVGGLKNIGQRLEKLAEALGVPFEFWA-VPSKTSLVTPS 381
                 **********************************6433346789************99888899***********************.79********* PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                 +L++kpgEal+Vn+++qlh+++desvs+++erd++L++vk+l+Pk+v+vveq++++n+++F+ rf+ea +yysa+fdsl+a+lpres +r++vEr++l+
  OWM63943.1 382 MLQLKPGEALIVNFAFQLHHMPDESVSTTNERDQLLRMVKGLNPKLVTVVEQDVNTNTAPFFPRFIEAYNYYSAVFDSLDATLPRESPDRMNVERHCLA 480
                 *************************************************************************************************** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 r+ivn+vaceg+er+er e ++kWr+r+++aGF++ p+s ++ ++++ +++k++ + y+++ee g+l +gW+d++L+++SaWr
  OWM63943.1 481 RDIVNIVACEGEERIERYEVAGKWRARMTMAGFTSRPMSRHISDNIREVISKHYCNKYQIKEEMGALHFGWEDKSLIVASAWR 563
                 ******************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MVKAGLFCSF SPPLPDRDHP EVYLLLSVVS AVDFDPRRAE QLLGISESYD PKYFIDSSLD  60
ETPQPTSSGI SEDLLHPPKN QFDGCPSNSE SDYLESLSLD CVDYDENKMR LKLQELERVL  120
LNDNEDVEEE DEMFSGPDLS MEVDGEWADQ IRPTNLHDSP KESSSTDSYV SSIGSSNKEI  180
SQLPSRSLKQ LLVDCAAALS EGNVIEASTM IEEVRRTVSI QGDPPQRIAA YMVEGLAARM  240
AASGKYIYKS LKCKEPPSLD RLAAMQILFE ICPCFKFGFM AANGAIIEAF KDEKSVHIID  300
FDINQGNQYI TLIQSIASIY QKSNKSKPVL RLTGVDDPES VQRPVGGLKN IGQRLEKLAE  360
ALGVPFEFWA VPSKTSLVTP SMLQLKPGEA LIVNFAFQLH HMPDESVSTT NERDQLLRMV  420
KGLNPKLVTV VEQDVNTNTA PFFPRFIEAY NYYSAVFDSL DATLPRESPD RMNVERHCLA  480
RDIVNIVACE GEERIERYEV AGKWRARMTM AGFTSRPMSR HISDNIREVI SKHYCNKYQI  540
KEEMGALHFG WEDKSLIVAS AWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein