PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM63648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 69aa MW: 7967.2 Da PI: 10.7015 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86 | 2.2e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien s rqvtf+kRr g++KKA+ LS+LCdae+a+iifsstgkl+e+ss OWM63648.1 9 KKIENLSARQVTFTKRRRGLIKKAHQLSTLCDAEIALIIFSSTGKLFEFSS 59 78***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence |
MTRKRIEIKK IENLSARQVT FTKRRRGLIK KAHQLSTLCD AEIALIIFSS TGKLFEFSSS 60 RSYSEESET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 2e-25 | MIKC_MADS family protein |