PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63625.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CAMTA

Protein Properties

Length: 1294aa MW: 142901 Da PI: 7.4653

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.2	4.4e-55	324	440	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e + rwl++ ei++iL n++k++lt e++trp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n+ fqrr+yw OWM63625.1 324 QEaQCRWLRPAEICEILRNYQKFSLTPEPPTRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNECFQRRSYW 422 45599******************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 +L+ +le+ivlvhy+evk OWM63625.1 423 MLDGQLEHIVLVHYREVK 440 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1294 aa Download sequence
MALSFCCTAS VPPLQRVNSK LSGKKCLQEV KSLVKSLGIH SVTSSPVDSL RSGNWVKLIC 60 GASFEDVVDI RNLSLVYTLA GVDCIDCAAD ESVVGAVHEG IEVAREILPV RRPWVMISVN 120 DDEDLHFRKA GVATYVRDAA ATAELIHKNN VEAIEIHTSG RNISQFKSLW EGLEDSVRHL 180 KLVAVSLPDL GDSTLSSMDA MYSIMEPRLQ CLNLWQLDGR PMSGDIGRGA TRESVAFAVR 240 LAAIRDRPNE SSNNEEPKYS LLQALIGGVA YGGYARKIVG RILTSVQSQH GLSRIEDYPE 300 HLLEAIVQAI GLVGTVKDLA QILQEAQCRW LRPAEICEIL RNYQKFSLTP EPPTRPPAGS 360 LFLFDRKALR YFRKDGHRWR KKKDGKTVKE AHEKLKAGSV DVLHCYYAHG EDNECFQRRS 420 YWMLDGQLEH IVLVHYREVK EGYKSSISRF LADRGSQDGG PQTSSVTCFP LANYPVSTPQ 480 TSYSTANKPE QSGQTVSAKI EDVDSVGTLG PFTLATPVYH PSQRASFLAS ENAGFPAPRN 540 PTQPWFAGGS DKVSAGPVLA EVHRSDANDT HDQEFYVGHK FYAGETSAAD FLNNKLAGAG 600 LEADCTALEI AGGNRLFTDS DLQVVEAASH GVALGNGPMQ NRAPVVASSG AQVESKSNVG 660 DGNNEELGSL RKLDSFGRWM DKEIGRDCDD SLMASDSGNY WNALTDENDD KEVSSLSRHM 720 QLDTDSLAPS LSQEQLFSIS DFSPDWAYSG IETKVLIVGT FLPSKDLTVK PKWGCMFGEI 780 EVPAEILTDT SMRCIAPSHA PGRVPFYITC SNRLACSEVR EFEYRERPST AIPIDPYEES 840 RLQIRLAKLL HLSEEDQLFD CPAEKCDKCE LKKAIYPMKV IGEGDTGREV CKLDHGYPID 900 AALQSLFRDR LGQWLLCKVH EGGKALHVLD EEGQGVIHLA AALGYEWAIG PIIAAGVTPN 960 FRDARGRTGL HWASYFGREE TVIALIELGA DPGLVDDPTP AFPAGQTAAD LASSRGHKGI 1020 AGYLAEADLT SRLSKLNVSY NVMDAVNLAS EKVIETASQV VSSSGTRDEE LSLKGSLAAV 1080 RKSAHAAALI QASFRARSFR QRQLTKGPNV VSEVLTDLIA LGSLNKVQKV GHFEDYLHSA 1140 AIRIQQKYRG WKGRKEFLKI RNRIVKVQAH VRGHQVRKQY KKVVWSVSIV EKAILRWRRK 1200 RVGLRAFRLD NSKDGAQVET EKTDEYDFLR IGRKQKFDGV ERALARVKSM VRDPRARGQY 1260 MRMVSKFDSC KAPLELRQAL HSCDLRARQA CPRP

Sequence ? help Back to Top

Protein Sequence Length: 1294 aa Download sequence

MALSFCCTAS VPPLQRVNSK LSGKKCLQEV KSLVKSLGIH SVTSSPVDSL RSGNWVKLIC  60
GASFEDVVDI RNLSLVYTLA GVDCIDCAAD ESVVGAVHEG IEVAREILPV RRPWVMISVN  120
DDEDLHFRKA GVATYVRDAA ATAELIHKNN VEAIEIHTSG RNISQFKSLW EGLEDSVRHL  180
KLVAVSLPDL GDSTLSSMDA MYSIMEPRLQ CLNLWQLDGR PMSGDIGRGA TRESVAFAVR  240
LAAIRDRPNE SSNNEEPKYS LLQALIGGVA YGGYARKIVG RILTSVQSQH GLSRIEDYPE  300
HLLEAIVQAI GLVGTVKDLA QILQEAQCRW LRPAEICEIL RNYQKFSLTP EPPTRPPAGS  360
LFLFDRKALR YFRKDGHRWR KKKDGKTVKE AHEKLKAGSV DVLHCYYAHG EDNECFQRRS  420
YWMLDGQLEH IVLVHYREVK EGYKSSISRF LADRGSQDGG PQTSSVTCFP LANYPVSTPQ  480
TSYSTANKPE QSGQTVSAKI EDVDSVGTLG PFTLATPVYH PSQRASFLAS ENAGFPAPRN  540
PTQPWFAGGS DKVSAGPVLA EVHRSDANDT HDQEFYVGHK FYAGETSAAD FLNNKLAGAG  600
LEADCTALEI AGGNRLFTDS DLQVVEAASH GVALGNGPMQ NRAPVVASSG AQVESKSNVG  660
DGNNEELGSL RKLDSFGRWM DKEIGRDCDD SLMASDSGNY WNALTDENDD KEVSSLSRHM  720
QLDTDSLAPS LSQEQLFSIS DFSPDWAYSG IETKVLIVGT FLPSKDLTVK PKWGCMFGEI  780
EVPAEILTDT SMRCIAPSHA PGRVPFYITC SNRLACSEVR EFEYRERPST AIPIDPYEES  840
RLQIRLAKLL HLSEEDQLFD CPAEKCDKCE LKKAIYPMKV IGEGDTGREV CKLDHGYPID  900
AALQSLFRDR LGQWLLCKVH EGGKALHVLD EEGQGVIHLA AALGYEWAIG PIIAAGVTPN  960
FRDARGRTGL HWASYFGREE TVIALIELGA DPGLVDDPTP AFPAGQTAAD LASSRGHKGI  1020
AGYLAEADLT SRLSKLNVSY NVMDAVNLAS EKVIETASQV VSSSGTRDEE LSLKGSLAAV  1080
RKSAHAAALI QASFRARSFR QRQLTKGPNV VSEVLTDLIA LGSLNKVQKV GHFEDYLHSA  1140
AIRIQQKYRG WKGRKEFLKI RNRIVKVQAH VRGHQVRKQY KKVVWSVSIV EKAILRWRRK  1200
RVGLRAFRLD NSKDGAQVET EKTDEYDFLR IGRKQKFDGV ERALARVKSM VRDPRARGQY  1260
MRMVSKFDSC KAPLELRQAL HSCDLRARQA CPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein