PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63002.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GeBP

Protein Properties

Length: 408aa MW: 44244.2 Da PI: 4.8319

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	112.3	3e-35	105	206	1	96
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++eDei lLqG+++f++++ + ++d++ fy+++k++++++++k+ql+eK+rrLKkK+++ +k++sgk++sf+++hd+ +fe+s+ OWM63002.1 105 KLFQRLWTDEDEIELLQGFLEFTSQRSTggvpagPGHHDTTLFYDQIKSKLQLDFNKNQLIEKLRRLKKKYRNVLNKISSGKDVSFKSPHDRATFEISR 203 579*****************9998776677744567********************************************************* PP DUF573 94 kiW 96 kiW OWM63002.1 204 KIW 206 * PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MASQQQEIHR AGFPGEDEDL DEDDDDVLDE DDANSASTSS SLPTATPVAP ISSVTVAVPS 60 SSLVLNGADP LPTSSIPSSS ASAPVAVIAT PVPLRMETTP PDSRKLFQRL WTDEDEIELL 120 QGFLEFTSQR STGGVPAGPG HHDTTLFYDQ IKSKLQLDFN KNQLIEKLRR LKKKYRNVLN 180 KISSGKDVSF KSPHDRATFE ISRKIWPNLT ASRGPHNETF DEDDDNNDNN TSFSLNPNFA 240 SPSPNFSSPN PNPNPNSRPI YEAILLPTNP RKRPRSQAQP VKVEEKAGGA ASDGPAGLNG 300 VTVSSGVSGI IEETVRSCLS PLFKELLNGS MMGSGGAFAG IAGIPAPFNL NSPSLLNFGG 360 LPLRGYGVEA GDERWRKQQI LELEVYSKRL ELVQEQIRAK LDELRSGR

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MASQQQEIHR AGFPGEDEDL DEDDDDVLDE DDANSASTSS SLPTATPVAP ISSVTVAVPS  60
SSLVLNGADP LPTSSIPSSS ASAPVAVIAT PVPLRMETTP PDSRKLFQRL WTDEDEIELL  120
QGFLEFTSQR STGGVPAGPG HHDTTLFYDQ IKSKLQLDFN KNQLIEKLRR LKKKYRNVLN  180
KISSGKDVSF KSPHDRATFE ISRKIWPNLT ASRGPHNETF DEDDDNNDNN TSFSLNPNFA  240
SPSPNFSSPN PNPNPNSRPI YEAILLPTNP RKRPRSQAQP VKVEEKAGGA ASDGPAGLNG  300
VTVSSGVSGI IEETVRSCLS PLFKELLNGS MMGSGGAFAG IAGIPAPFNL NSPSLLNFGG  360
LPLRGYGVEA GDERWRKQQI LELEVYSKRL ELVQEQIRAK LDELRSGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	276	PRKRPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	3e-66	GeBP family protein