PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM62859.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 749aa MW: 80453.6 Da PI: 7.2899

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM62859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	505	551	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq OWM62859.1 505 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 551 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MPLFELFRAA RGKLSAAHEK PTSVSADPSF PPENDHVELV WESGQVVMQG QTSRAKRNPS 60 ANNSHSVPPY SIPSHSPKRD RDLSSCPQPS SSVKFRIPDS GLNELPMSVP LGEMCLSSDD 120 DIVPWFDYPM DESLGNDYCS GFLPEISSVT ANEPSQNNFD TMKRGSCSNQ AYRDSDIKSV 180 HDGLSLDHRT SKISSLANEP SHNNFDAMKR GSCSNQPQKD SNINSMQDGL SLDHRNSSKT 240 SSLAVTSEPI RPGPSHAPAQ QTQFPSRRMR QVSENTGTST NNYRVIGDSS RLTNSALGVP 300 SKRSGKQNPG PSSSRTEFVN FSHFSRPAAL YKSIVENKCL TVDSGPSSLD SAGKHNDSSP 360 GGKTVKANCG PMREMRCHGQ FLVEKQVPDS RSLEAKPSEK PPLKEPEGIR QKYAAKDDKQ 420 SNESPGPSTS KEPRDAAEPV VASSVCSGNG VDSVSDDPPS NLKRKGCSNY DSEAPSEDVE 480 EDSVGVRKST PARGSGSKRS RAAEVHNLSE RRRRDRINEK MRALQELIPN CNKVDKASML 540 DEAIEYLKTL QLQVQIMSMG AGLYVPPMML PAHMAQFSPM GVGMAAGLGF RMGMVKPHGG 600 PPTCPMFRVP PMQGAHFPSP IMSGHPALHG MVGPNFPVMG LPGQGIPVSM PQQPPSVPFP 660 GGPPLRPYAG LNASGMTGHM EYPDAAFASS SKGPAETING ASSSMNQNLS EYQSKHSGCE 720 QPENGAVAST TTARDDNGPS TAANEEKPV

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MPLFELFRAA RGKLSAAHEK PTSVSADPSF PPENDHVELV WESGQVVMQG QTSRAKRNPS  60
ANNSHSVPPY SIPSHSPKRD RDLSSCPQPS SSVKFRIPDS GLNELPMSVP LGEMCLSSDD  120
DIVPWFDYPM DESLGNDYCS GFLPEISSVT ANEPSQNNFD TMKRGSCSNQ AYRDSDIKSV  180
HDGLSLDHRT SKISSLANEP SHNNFDAMKR GSCSNQPQKD SNINSMQDGL SLDHRNSSKT  240
SSLAVTSEPI RPGPSHAPAQ QTQFPSRRMR QVSENTGTST NNYRVIGDSS RLTNSALGVP  300
SKRSGKQNPG PSSSRTEFVN FSHFSRPAAL YKSIVENKCL TVDSGPSSLD SAGKHNDSSP  360
GGKTVKANCG PMREMRCHGQ FLVEKQVPDS RSLEAKPSEK PPLKEPEGIR QKYAAKDDKQ  420
SNESPGPSTS KEPRDAAEPV VASSVCSGNG VDSVSDDPPS NLKRKGCSNY DSEAPSEDVE  480
EDSVGVRKST PARGSGSKRS RAAEVHNLSE RRRRDRINEK MRALQELIPN CNKVDKASML  540
DEAIEYLKTL QLQVQIMSMG AGLYVPPMML PAHMAQFSPM GVGMAAGLGF RMGMVKPHGG  600
PPTCPMFRVP PMQGAHFPSP IMSGHPALHG MVGPNFPVMG LPGQGIPVSM PQQPPSVPFP  660
GGPPLRPYAG LNASGMTGHM EYPDAAFASS SKGPAETING ASSSMNQNLS EYQSKHSGCE  720
QPENGAVAST TTARDDNGPS TAANEEKPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	510	515	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-49	bHLH family protein