PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM62836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 326aa MW: 37518.7 Da PI: 4.6705 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 27 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v G g+W+++ar g++Rt+k+c++rw++yl OWM62836.1 27 KGPWTAEEDALLMNYVSINGEGRWNSVARFAGLKRTGKSCRLRWLNYL 74 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.6e-15 | 80 | 123 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++I+++++ gRt++++k++w++ OWM62836.1 80 RGSITLQEQLLILELHSRWGNR-WSKISQYLP-GRTDNEIKNYWRT 123 78889*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MEVRVARCFS PETSDVNENE FIMDVKKGPW TAEEDALLMN YVSINGEGRW NSVARFAGLK 60 RTGKSCRLRW LNYLRPDLRR GSITLQEQLL ILELHSRWGN RWSKISQYLP GRTDNEIKNY 120 WRTRVQKQAK QLKCEVNSKQ FRDAMEHVWM PRLRERIQSL SGNSASSAQP TDAATYPVDP 180 TSNHTRDQNI VYQMDQTAGW SNTFNSSFIT EILAASSDSY LDNTQASLVS YSSDHYGPWE 240 GSCMDKSFIT EIPAASSDSY VDNTQVSLVS DSSDHYCPWE GSCMDNIFDV SFSWPENLCD 300 SPGDLMMENM WNEENIRLLQ QQLFED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 2e-73 | MYB family protein |