PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA20838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 656aa MW: 71835.6 Da PI: 6.4425 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 363.4 | 3.1e-111 | 283 | 656 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++ L+++A+a+s+g+ e+a + L rl+ +++ +g++ +Rl+ay++ AL++r++ ++ pps + n see++ +l +e+sP++++++++aN OVA20838.1 283 KQSLIDAANAISEGNIEAAISNLDRLKPISNTKGNSEHRLTAYMVSALRSRINP-----VENPPPSVM-QLNRSEEMMLNQLVYEASPCFELGFMAANL 375 578***************************************************.....444444444.356899999********************* PP GRAS 101 aIleavege...ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledlele 192 aIle ++ + + +H++Dfdi+qGlQ+++L++a+a+R+ + + s++iT+v +p+ g +++ l+ +g+ L+++A+ +g+ f+fnv v+++++dl+ + OVA20838.1 376 AILEFTKDQppnNVLHVVDFDIGQGLQYINLIHAFAERSlpgKTKTSIKITTVTDPSDGnEENGLRIVGDWLKNLADGVGIGFKFNV-VSRKISDLNRD 473 ********9997777************************9866678***********999999***********************9.7********** PP GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291 L ++++E+laVn++++lhrl+desvs+e++rde+L++vk+l Pkvv++veqe+++n+++F++r++e++ yy alfdsl+a++ r+s++r+ vE+ l+ OVA20838.1 474 LLCIESDESLAVNFAFKLHRLPDESVSTENPRDELLRFVKGLGPKVVTLVEQEMNCNTAPFVARLTESCGYYRALFDSLDATMTRDSKKRARVEEY-LA 571 ***********************************************************************************************9.** PP GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374 r+++n vaceg++r+er+e ++kWr+r+++aGF+ pls+++ ++ ++ l+ v+ + g++v+ee g +++gW+++ L+++SaWr OVA20838.1 572 RKASNSVACEGRDRVERCEVFGKWRARMGMAGFELRPLSQNVSDSLRSRLSSVHrtNPGFTVKEEAGGICFGWMGKVLTVASAWR 656 ***************************************************99987889*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 656 aa Download sequence |
MASGFPGGGD FYSSAGINGG GGGGGGGGGG SSMINNVHQV QYRSQLGGIL VDSSSSSPMV 60 PPRRTDLLAK RSLAELQLQQ QQQQAFLMRM VKQRTQQQLN RTSPISPLSP VDSEISTRYG 120 YGSSQVVLGN NQGFGIGINH HPLLQPPRLI NPNIQSSYLS EPSLSNLSFS NSVPQNRQAV 180 VVLESETESE KKMRNRLQEL EKQLLDDEDD AYNVEDEGDT ASVITGNNEW TETMQNLFRP 240 SPIHPPQNPN NTNQKPLSPS PTTSSSSSSS SSPTSQLTSI SSKQSLIDAA NAISEGNIEA 300 AISNLDRLKP ISNTKGNSEH RLTAYMVSAL RSRINPVENP PPSVMQLNRS EEMMLNQLVY 360 EASPCFELGF MAANLAILEF TKDQPPNNVL HVVDFDIGQG LQYINLIHAF AERSLPGKTK 420 TSIKITTVTD PSDGNEENGL RIVGDWLKNL ADGVGIGFKF NVVSRKISDL NRDLLCIESD 480 ESLAVNFAFK LHRLPDESVS TENPRDELLR FVKGLGPKVV TLVEQEMNCN TAPFVARLTE 540 SCGYYRALFD SLDATMTRDS KKRARVEEYL ARKASNSVAC EGRDRVERCE VFGKWRARMG 600 MAGFELRPLS QNVSDSLRSR LSSVHRTNPG FTVKEEAGGI CFGWMGKVLT VASAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52510.1 | 1e-118 | GRAS family protein |