PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20838.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 656aa    MW: 71835.6 Da    PI: 6.4425
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS363.43.1e-1112836562374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ L+++A+a+s+g+ e+a + L rl+ +++ +g++ +Rl+ay++ AL++r++      ++  pps   + n see++  +l +e+sP++++++++aN 
  OVA20838.1 283 KQSLIDAANAISEGNIEAAISNLDRLKPISNTKGNSEHRLTAYMVSALRSRINP-----VENPPPSVM-QLNRSEEMMLNQLVYEASPCFELGFMAANL 375
                 578***************************************************.....444444444.356899999********************* PP

        GRAS 101 aIleavege...ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                 aIle ++ +   + +H++Dfdi+qGlQ+++L++a+a+R+   + + s++iT+v +p+ g +++ l+ +g+ L+++A+ +g+ f+fnv v+++++dl+ +
  OVA20838.1 376 AILEFTKDQppnNVLHVVDFDIGQGLQYINLIHAFAERSlpgKTKTSIKITTVTDPSDGnEENGLRIVGDWLKNLADGVGIGFKFNV-VSRKISDLNRD 473
                 ********9997777************************9866678***********999999***********************9.7********** PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                  L ++++E+laVn++++lhrl+desvs+e++rde+L++vk+l Pkvv++veqe+++n+++F++r++e++ yy alfdsl+a++ r+s++r+ vE+  l+
  OVA20838.1 474 LLCIESDESLAVNFAFKLHRLPDESVSTENPRDELLRFVKGLGPKVVTLVEQEMNCNTAPFVARLTESCGYYRALFDSLDATMTRDSKKRARVEEY-LA 571
                 ***********************************************************************************************9.** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 r+++n vaceg++r+er+e ++kWr+r+++aGF+  pls+++ ++ ++ l+ v+  + g++v+ee g +++gW+++ L+++SaWr
  OVA20838.1 572 RKASNSVACEGRDRVERCEVFGKWRARMGMAGFELRPLSQNVSDSLRSRLSSVHrtNPGFTVKEEAGGICFGWMGKVLTVASAWR 656
                 ***************************************************99987889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    
MASGFPGGGD FYSSAGINGG GGGGGGGGGG SSMINNVHQV QYRSQLGGIL VDSSSSSPMV  60
PPRRTDLLAK RSLAELQLQQ QQQQAFLMRM VKQRTQQQLN RTSPISPLSP VDSEISTRYG  120
YGSSQVVLGN NQGFGIGINH HPLLQPPRLI NPNIQSSYLS EPSLSNLSFS NSVPQNRQAV  180
VVLESETESE KKMRNRLQEL EKQLLDDEDD AYNVEDEGDT ASVITGNNEW TETMQNLFRP  240
SPIHPPQNPN NTNQKPLSPS PTTSSSSSSS SSPTSQLTSI SSKQSLIDAA NAISEGNIEA  300
AISNLDRLKP ISNTKGNSEH RLTAYMVSAL RSRINPVENP PPSVMQLNRS EEMMLNQLVY  360
EASPCFELGF MAANLAILEF TKDQPPNNVL HVVDFDIGQG LQYINLIHAF AERSLPGKTK  420
TSIKITTVTD PSDGNEENGL RIVGDWLKNL ADGVGIGFKF NVVSRKISDL NRDLLCIESD  480
ESLAVNFAFK LHRLPDESVS TENPRDELLR FVKGLGPKVV TLVEQEMNCN TAPFVARLTE  540
SCGYYRALFD SLDATMTRDS KKRARVEEYL ARKASNSVAC EGRDRVERCE VFGKWRARMG  600
MAGFELRPLS QNVSDSLRSR LSSVHRTNPG FTVKEEAGGI CFGWMGKVLT VASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-118GRAS family protein