PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20472.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 326aa MW: 37171.9 Da PI: 8.1975

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	88.3	8.6e-28	11	91	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem+ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk+k+++++ s + +y+++l+ OVA20472.1 11 WVQEETRSLINFRREMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKTKHHDRGA----SAKLAYYKELD 91 ********************************************************************85....66789999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MKAPKKRAET WVQEETRSLI NFRREMDGLF NTSKSNKHLW EQISSKMREK GFDRSPTMCT 60 DKWRNLLKEF KKTKHHDRGA SAKLAYYKEL DELIKERNKN APYKTPIPTK VDAYIQFSEK 120 GLEDGGIPFG PVEAGGRSTL NLERRLDHDG HPLAITAADT VAGSGVPPWN WRDTPGNGGE 180 SNPVYGGRVI SVKWGPGDFT RRIGIDGTAD AIKEAIKSAF GLRTRRAFWL EDEDDIVRSL 240 DRDMPLGTYT LHLDEGITIK ICFYDESDRI PVRTEEKTLY TEDDFRDLLT RRGWTGLREL 300 TGFRSVDTLD ELRPGAMYQG VRLLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-166	Trihelix family protein