PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19923.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 346aa MW: 38280.9 Da PI: 6.798

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	102.5	2.4e-32	87	191	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+kv tpsdv+k++rlv+pk++ae++ ++ +e++ l +ed+sg+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v+F++ g+ + +++ OVA19923.1 87 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSANEKGLLLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVTFERGaGEsVKDRFF 185 89*************************966667889***********************************************665666667778 PP EEEE-S CS B3 94 vkvfrk 99 + ++r+ OVA19923.1 186 IDWRRR 191 888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MEFVHHQGRR DGFYEEEEEE VIGDNTNTTG KQPFSSSFSS SSPSSSQYRN DVVVQQPSFG 60 GGGDGGGGGA AAASVADVVC IEREHMFDKV VTPSDVGKLN RLVIPKQHAE KYFPLDSSAN 120 EKGLLLNFED RSGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKKLDAGDIV TFERGAGESV 180 KDRFFIDWRR RTNTPDLASL PSLSLPRTVV PWVFYLRSSS SSAPQQVGVV QQAAGIREDN 240 VPMVFDSVPV VHGKAAAKRV RLFGVNLECP ISEDPNNECD ILSSTTIPMN TTMGSSLPHP 300 HQMMNNPSHP LHPSLQLRVY NGAPLPAMQT ELPKRGRPSL SFDLDV

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MEFVHHQGRR DGFYEEEEEE VIGDNTNTTG KQPFSSSFSS SSPSSSQYRN DVVVQQPSFG  60
GGGDGGGGGA AAASVADVVC IEREHMFDKV VTPSDVGKLN RLVIPKQHAE KYFPLDSSAN  120
EKGLLLNFED RSGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKKLDAGDIV TFERGAGESV  180
KDRFFIDWRR RTNTPDLASL PSLSLPRTVV PWVFYLRSSS SSAPQQVGVV QQAAGIREDN  240
VPMVFDSVPV VHGKAAAKRV RLFGVNLECP ISEDPNNECD ILSSTTIPMN TTMGSSLPHP  300
HQMMNNPSHP LHPSLQLRVY NGAPLPAMQT ELPKRGRPSL SFDLDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-63	B3 family protein