PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19822.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 689aa MW: 76057.2 Da PI: 4.9852

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30	9.4e-10	463	505	8	55
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ +++ +Lr l+P+ + K++ a+iL A+e++k+Lq OVA19822.1 463 AERKRRKKLSERLYKLRALVPNiS------KMDRASILGDAIEFVKELQ 505 7*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MEKKLRPLVG LKSWDYCVLW KLGEDQRSLE WVACCCGGAE DNDHMKYSTQ NGRGEELPMF 60 PVSPVGPCRD LMFQHPRTIN CDLLAHLPSS IPLNSAGAHA QSLISNQPRW INTIPNCSSD 120 DSSGFSEETF GTRVLIPVPG GLIEFFVAKH VSEDPHIIEF VMAQCNLSSW EQQQDAMIMN 180 IRMNSIDDDG GFQVDDNGLT IANPQPPPLK HQQQYYSNKS TQALAPSNIT NHFHTSTWVS 240 SSPSNSNANT TTTATTTTAT MTDVNFNLPW DLSVDRIRLC SSTSSSPPPM NLFGGGSEAG 300 KQHLDSDTVV VDPSIVSDDQ KRHNDDDHDL PRRPPTSTNI SGYADFVSLQ ESLMSDAANL 360 QYSSNIEYSS MTTTTTKLQE DPAGSAAAGQ DRDRDRDRDR DSGNYKQGAA AETAGGRADS 420 VSGCSTDQMI EDDDDDDQTK VMLGAGRSSS SSGRPNQSKN LFAERKRRKK LSERLYKLRA 480 LVPNISKMDR ASILGDAIEF VKELQKQVKD LQDELEEPAG DQENSGGGDH SCRNVNNKKQ 540 MMCLQLDHQM LNLHHQNGIT SRTVDDHSHP SPSATTNSRC SSSINVQVEV TQIDRNEFFL 600 KVFCEHKPGG FVRLMEAMNS LGLEVTNANV TTFRGLVLNV FKVEQKRDDE MVQADHVRDS 660 LLELTRDRTG AGWSSSEPAV VLDHQAPKT

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MEKKLRPLVG LKSWDYCVLW KLGEDQRSLE WVACCCGGAE DNDHMKYSTQ NGRGEELPMF  60
PVSPVGPCRD LMFQHPRTIN CDLLAHLPSS IPLNSAGAHA QSLISNQPRW INTIPNCSSD  120
DSSGFSEETF GTRVLIPVPG GLIEFFVAKH VSEDPHIIEF VMAQCNLSSW EQQQDAMIMN  180
IRMNSIDDDG GFQVDDNGLT IANPQPPPLK HQQQYYSNKS TQALAPSNIT NHFHTSTWVS  240
SSPSNSNANT TTTATTTTAT MTDVNFNLPW DLSVDRIRLC SSTSSSPPPM NLFGGGSEAG  300
KQHLDSDTVV VDPSIVSDDQ KRHNDDDHDL PRRPPTSTNI SGYADFVSLQ ESLMSDAANL  360
QYSSNIEYSS MTTTTTKLQE DPAGSAAAGQ DRDRDRDRDR DSGNYKQGAA AETAGGRADS  420
VSGCSTDQMI EDDDDDDQTK VMLGAGRSSS SSGRPNQSKN LFAERKRRKK LSERLYKLRA  480
LVPNISKMDR ASILGDAIEF VKELQKQVKD LQDELEEPAG DQENSGGGDH SCRNVNNKKQ  540
MMCLQLDHQM LNLHHQNGIT SRTVDDHSHP SPSATTNSRC SSSINVQVEV TQIDRNEFFL  600
KVFCEHKPGG FVRLMEAMNS LGLEVTNANV TTFRGLVLNV FKVEQKRDDE MVQADHVRDS  660
LLELTRDRTG AGWSSSEPAV VLDHQAPKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	464	471	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-49	bHLH family protein