PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19738.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CO-like

Protein Properties

Length: 411aa MW: 44779.6 Da PI: 5.0661

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.9	1.5e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ ++e++ + +C+++ +lC +C + H+ H++ OVA19738.1 4 LCDFCGEQRSIVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP
2	zf-B_box	26.4	1.4e-08	46	90	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+++++++++ C + ++ lC++C ++H g H+++++ OVA19738.1 46 LLCERCNSQPASVRCAEENMSLCQNCDWNGHGGstsssaHKRQSI 90 57*****************************66999999998775 PP
3	CCT	63.3	7.6e-22	354	397	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ a+lRY+eK+k RkF+KkirY+sRKa+A+ R RvKGrFvk+ OVA19738.1 354 RDSAVLRYREKKKARKFDKKIRYASRKARADVRRRVKGRFVKAG 397 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MGHLCDFCGE QRSIVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPASVRC 60 AEENMSLCQN CDWNGHGGST SSSAHKRQSI NCYSGCPSAS ELSRIWSFVL DFTSMDDPNC 120 ERGMGLMSID ENSVSNCWGP SEMNNKVDVA VSSGNNDMEN MEKFDMWMES SSMPTLNAMQ 180 CGVDQPAGSL DSTAPKLSSP GTKGLELCED DLYEDFSVAD VDLNFENYDE LFGVSQSHSE 240 HLFENGGIDS LFGMKDITGA DSNCQGSSGG KVTAKQPACS SAVSGDSTMS TKTEPIISYA 300 ARQANSSRSL SFSGFTGESS AGDYQDCGVS SMLGMGEPPW YPPGTEGSFT SAGRDSAVLR 360 YREKKKARKF DKKIRYASRK ARADVRRRVK GRFVKAGDAY DYDPLCQTRS Y

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MGHLCDFCGE QRSIVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPASVRC  60
AEENMSLCQN CDWNGHGGST SSSAHKRQSI NCYSGCPSAS ELSRIWSFVL DFTSMDDPNC  120
ERGMGLMSID ENSVSNCWGP SEMNNKVDVA VSSGNNDMEN MEKFDMWMES SSMPTLNAMQ  180
CGVDQPAGSL DSTAPKLSSP GTKGLELCED DLYEDFSVAD VDLNFENYDE LFGVSQSHSE  240
HLFENGGIDS LFGMKDITGA DSNCQGSSGG KVTAKQPACS SAVSGDSTMS TKTEPIISYA  300
ARQANSSRSL SFSGFTGESS AGDYQDCGVS SMLGMGEPPW YPPGTEGSFT SAGRDSAVLR  360
YREKKKARKF DKKIRYASRK ARADVRRRVK GRFVKAGDAY DYDPLCQTRS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-122	CO-like family protein