PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19535.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 269aa MW: 30298.8 Da PI: 4.5463

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	8.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ + G +W+++++ g+ R++k+c++rw +yl OVA19535.1 14 KGPWTAEEDKKLVNFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.6	1.1e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d+++ lG++ W++Ia++++ gRt++++k++w+++ OVA19535.1 70 LTEAEEQLVIDLHAHLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 699**************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLVNFIL NNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL TEAEEQLVID LHAHLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLTKMG 120 IDPVTHEPLN KQQEVTLTGD QPESGENPLQ LPETNRVMDA SLEEISSSSP PENCTSSDES 180 RSTPDNNPDD DPLMSLIWDN ETLLVDPSWD FPAVGKNSND TGDQSLLEEN YGWLLFDYQD 240 FGVEEFGLGC FNDKDLGTDL TTFGIGDER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	9e-93	MYB family protein