PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18848.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 465aa MW: 52562.8 Da PI: 9.1129

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.2	5e-22	39	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++Y++e GF++ k++s+k+ + +e + f+Cs++g ++++ ++ +k +r++++ +t+Cka++ + ++ + +w+v +++ +HnH+++ OVA18848.1 39 DFYQDYGREKGFTIHKRSSYKTAKGKELSRVLFTCSCQGVHKPKPNSneqPNKIKRNTSTIKTDCKASMFLALDPkNRTWYVRSFVDDHNHAMV 132 6**************************************99998855556677799999*********999************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MATSEGIETT NDVKTPKSNK NPKKPFVGMD FSSIEEAQDF YQDYGREKGF TIHKRSSYKT 60 AKGKELSRVL FTCSCQGVHK PKPNSNEQPN KIKRNTSTIK TDCKASMFLA LDPKNRTWYV 120 RSFVDDHNHA MVTSSKRVLM RSNRYMHPAA KSLAEAFNKE KLRVGKRIFD SEDLLVKHAS 180 KIYTRYAFDK VLSEFNASLH FLSEVLENDG NQFTFKVSSR GDKKEEFVVT MNQVTKEGAC 240 GCQMFEFCGL PCRHLHHILV LRFYAEEIPS HFILKRWMKD PNRAEVIDSN GLVLHAENVG 300 TDAIQISHYC RRSTELAYLL GKSKEAYNVA IDLLNHAFEE VRQIDNVELQ RENTDELHLE 360 SCGSVPITTM GDPRVTQAKG RPRDEKGKPL VVAGACRYKS GIEKSQAKKK PRTCQTCNVV 420 GHDSRNCGKR KALQLNIANK NPDVNECAID LAQDGAEIAL AISNT

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MATSEGIETT NDVKTPKSNK NPKKPFVGMD FSSIEEAQDF YQDYGREKGF TIHKRSSYKT  60
AKGKELSRVL FTCSCQGVHK PKPNSNEQPN KIKRNTSTIK TDCKASMFLA LDPKNRTWYV  120
RSFVDDHNHA MVTSSKRVLM RSNRYMHPAA KSLAEAFNKE KLRVGKRIFD SEDLLVKHAS  180
KIYTRYAFDK VLSEFNASLH FLSEVLENDG NQFTFKVSSR GDKKEEFVVT MNQVTKEGAC  240
GCQMFEFCGL PCRHLHHILV LRFYAEEIPS HFILKRWMKD PNRAEVIDSN GLVLHAENVG  300
TDAIQISHYC RRSTELAYLL GKSKEAYNVA IDLLNHAFEE VRQIDNVELQ RENTDELHLE  360
SCGSVPITTM GDPRVTQAKG RPRDEKGKPL VVAGACRYKS GIEKSQAKKK PRTCQTCNVV  420
GHDSRNCGKR KALQLNIANK NPDVNECAID LAQDGAEIAL AISNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-18	FAR1 family protein