PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18762.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 471aa MW: 51300.4 Da PI: 6.8486

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.4	6.8e-05	354	392	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq OVA18762.1 354 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 392 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MESADLHHHQ HQLQEQLIGS SSLATSTPSF STTFTNNNAW NPNLILIAGN LNSNINGLLS 60 NSSSTDSRQN CSDINLVPPS NPSMIQELGF HEWASNNEGN NFSSHSAHEL HLARIKEEFP 120 KFSDTTMNGA APPSNLEEFH FPSTSYIKHE LQDLNNTLSH EKLLLKTFSS ACQLNGLHHQ 180 AVSAGDDDPH QFYSNSQSCA SFGGVATSNR ENFSQIFPRN LDPPCSSFSS SLGMNLQTLD 240 LWNPTKFGGS STQPPQHNNN LGLFKQAAGP SFVLDHLQES SHTPSYITNK ISSFMMMNGS 300 ASSSSSSAVN TDQTKRSSSS SDHHHQSKTS HHNHVASKKP RTESRSSFPP FKVRKEKLGD 360 RIAALQQLVA PFGKTDTASV LMEAIGYIKF LQDQVETLSV PYMKSSRNIT RSSGQGSCLD 420 TQGSYMVEGS NEGKRDLRSR GLCLVPLSCT SYVTNDDGGS VWSVPNFGGG A

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MESADLHHHQ HQLQEQLIGS SSLATSTPSF STTFTNNNAW NPNLILIAGN LNSNINGLLS  60
NSSSTDSRQN CSDINLVPPS NPSMIQELGF HEWASNNEGN NFSSHSAHEL HLARIKEEFP  120
KFSDTTMNGA APPSNLEEFH FPSTSYIKHE LQDLNNTLSH EKLLLKTFSS ACQLNGLHHQ  180
AVSAGDDDPH QFYSNSQSCA SFGGVATSNR ENFSQIFPRN LDPPCSSFSS SLGMNLQTLD  240
LWNPTKFGGS STQPPQHNNN LGLFKQAAGP SFVLDHLQES SHTPSYITNK ISSFMMMNGS  300
ASSSSSSAVN TDQTKRSSSS SDHHHQSKTS HHNHVASKKP RTESRSSFPP FKVRKEKLGD  360
RIAALQQLVA PFGKTDTASV LMEAIGYIKF LQDQVETLSV PYMKSSRNIT RSSGQGSCLD  420
TQGSYMVEGS NEGKRDLRSR GLCLVPLSCT SYVTNDDGGS VWSVPNFGGG A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	2e-51	bHLH family protein