PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18482.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 544aa MW: 60314.7 Da PI: 6.0165

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	6.9e-13	338	385	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h E++RR++ N+++ L +l+P++ kK++ a+++ A++YIk+L OVA18482.1 338 TKHFTTEKQRREQFNEKYKALSQLVPNP----TKKPDRASVVGDAIDYIKEL 385 5799*********************9....799*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MYDETHYFDS HDPHSIPGGG GGGGGGGGGV GSSVLICPSQ TVQNSSSGLP VLEADNIKLS 60 TTTSTSSFSI DIDLSNHQHN HNQQSEESAV AAATMDFELE QEFNTHLMQE VLVHHHDRNS 120 EAPGFDQSNW EVHHQEMQEM SSDQQAQFYH QQHQMELQNN LQCFNSNPFT NPSYISAPTS 180 TPDLLNLLHL PRCTTSSSML PNSSISFSNS RPMNFQTSSL EIFGNNEGEN ASGSSILYDH 240 HHHHPPLHLN NLPPQPPIFR ELFQTLPHNY GLNGGVGSTL FGGGMDEREG ITGGVGGVIY 300 HHQDGDGMRQ FENSVLDFRR EMNVNGGTGG LKRGGHGTKH FTTEKQRREQ FNEKYKALSQ 360 LVPNPTKKPD RASVVGDAID YIKELRRTVD ELKILVDKKR CGRERNKKLK TEDEAAGGGD 420 MAESSSMKPT INTVVDRENS FNGPERSSWI QRKSKETEID VRIIDDDVTI KLIQRSKMNN 480 LLLVSKILDE LQLDLLHVSG GCIGDYYSFL FNTKIYEGSS VYASAIAKKL IEGVDKKAFK 540 PDSY

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MYDETHYFDS HDPHSIPGGG GGGGGGGGGV GSSVLICPSQ TVQNSSSGLP VLEADNIKLS  60
TTTSTSSFSI DIDLSNHQHN HNQQSEESAV AAATMDFELE QEFNTHLMQE VLVHHHDRNS  120
EAPGFDQSNW EVHHQEMQEM SSDQQAQFYH QQHQMELQNN LQCFNSNPFT NPSYISAPTS  180
TPDLLNLLHL PRCTTSSSML PNSSISFSNS RPMNFQTSSL EIFGNNEGEN ASGSSILYDH  240
HHHHPPLHLN NLPPQPPIFR ELFQTLPHNY GLNGGVGSTL FGGGMDEREG ITGGVGGVIY  300
HHQDGDGMRQ FENSVLDFRR EMNVNGGTGG LKRGGHGTKH FTTEKQRREQ FNEKYKALSQ  360
LVPNPTKKPD RASVVGDAID YIKELRRTVD ELKILVDKKR CGRERNKKLK TEDEAAGGGD  420
MAESSSMKPT INTVVDRENS FNGPERSSWI QRKSKETEID VRIIDDDVTI KLIQRSKMNN  480
LLLVSKILDE LQLDLLHVSG GCIGDYYSFL FNTKIYEGSS VYASAIAKKL IEGVDKKAFK  540
PDSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	2e-53	bHLH family protein