PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18426.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRF

Protein Properties

Length: 358aa MW: 39270.4 Da PI: 8.3665

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.9	4.9e-25	79	123	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ OVA18426.1 79 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVET 123 79****************************************997 PP
2	QLQ	66.3	7.2e-23	18	53	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l++KyL+a++PvPpeL+++i+k OVA18426.1 18 PFTASQWQELEHQALIFKYLMAGLPVPPELVLPIRK 53 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MNNTSAAATG TATAFRPPFT ASQWQELEHQ ALIFKYLMAG LPVPPELVLP IRKSFESMSA 60 RFFHHPSMGY CSFYGKKADP EPGRCRRTDG KKWRCSKDAY PDSKYCERHM HRGRNRSRKP 120 VETQSISQSS TVTSLTATTG SSGGGGSGGG GGGGAGGNAN FQNLPLMGNH QVLCSGSNPS 180 LLQMESVPYG VASKEYRYFH GMKPETDEHS FFSEASGSSR GLGMDTSMEN SWRLMPSRVS 240 SFPQSKSRNG SIMQGDYSQM HALQDLGQAT MSAALSKQHQ QQQHCFFGSE YGSSEAVKQE 300 GQSLRPFFDE WPKTRDSWSD LEDERSNRTS FSTTQLSISI PMASSDFSAT SSRSPNDD

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MNNTSAAATG TATAFRPPFT ASQWQELEHQ ALIFKYLMAG LPVPPELVLP IRKSFESMSA  60
RFFHHPSMGY CSFYGKKADP EPGRCRRTDG KKWRCSKDAY PDSKYCERHM HRGRNRSRKP  120
VETQSISQSS TVTSLTATTG SSGGGGSGGG GGGGAGGNAN FQNLPLMGNH QVLCSGSNPS  180
LLQMESVPYG VASKEYRYFH GMKPETDEHS FFSEASGSSR GLGMDTSMEN SWRLMPSRVS  240
SFPQSKSRNG SIMQGDYSQM HALQDLGQAT MSAALSKQHQ QQQHCFFGSE YGSSEAVKQE  300
GQSLRPFFDE WPKTRDSWSD LEDERSNRTS FSTTQLSISI PMASSDFSAT SSRSPNDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-44	GRF family protein