PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18409.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Trihelix
Protein Properties Length: 308aa    MW: 36749.4 Da    PI: 8.4752
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.13.6e-2653134186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++qe+++ i +r e+e++++ +k++k+lWe vs km+erg++rsp qCk+kw+nl +ryk  ++++ ++     ++cp+f++l+
  OVA18409.1  53 QWSHQETRDFISIRAELERDFNVSKRNKTLWEIVSVKMKERGYRRSPDQCKCKWKNLVNRYKGKETSDPEN----GRQCPFFEELR 134
                 7**************************************************************99999974....678******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MMLGGGGENE TLNRMNMMSA AAAALPLQLN PATITGEMST SSMSMKKDER VPQWSHQETR  60
DFISIRAELE RDFNVSKRNK TLWEIVSVKM KERGYRRSPD QCKCKWKNLV NRYKGKETSD  120
PENGRQCPFF EELRAVFTER EKNMHRLLVE SESGGVQMKK KVKRQSGDRS SDDFSDEDDD  180
GEDDSEEERL TRSTSRKRKA IKDRNQRNTA SEKGTNSGIQ EMLQEFFQQQ QRMEMQWREM  240
MERRAMERRM FEQEWRQSME KLERERLMIE QAWREREEQR RMREESRAEK RDALLTTLLN  300
KLIHEDHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.11e-30Trihelix family protein