PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA18282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB_related | ||||||||
Protein Properties | Length: 238aa MW: 27461.9 Da PI: 5.1104 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 41 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ OVA18282.1 41 RGRMTPQEERLVLELHSRWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 86 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MEVEGAMYLN LPWLILFVGL NRTGKSCRLR WVNYLHPGLK RGRMTPQEER LVLELHSRWG 60 NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QEMRKRATMM PSASSSTITT MVESPTKSQN 120 IIEGDSSNLN GKGSCVTDFA VRGNEVSEEE EEEEEEDYSM DQIWKEIASS EEEVNSEQVF 180 DGVSKKEGCS FSCPPMDSPL WEFGSDPLWK MDDEFKMLAP MGGTADRFVF NYVHRGES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.2 | 4e-61 | MYB_related family protein |