PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17848.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 686aa MW: 74670 Da PI: 8.0208

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	584	633	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ OVA17848.1 584 RRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 633 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MVLQKRLDYG FNGYQVPAMP RACRSARGRG SLKRKVEETQ MGAFELLATV AGKLLQERET 60 SPALSNESAR RTQITVVEDN VKQEQRDEEK SLKVEPCDQV SSHESVVVSE FGLQGHDQNN 120 NLQEFARAQN NVVSGPASLI VNCDLSEKVG SAEETATGKS RSGNTSSKVK GGSTDNVEYY 180 KGKVEGGIEK VGNLINGTVP DTCSSDDPLE SDTKPPALVS SDSSIEVPLL REHLTCGSFP 240 GCRDDVKLVS RDDEENSSGC TQPSTTPLKA SRPPPHIEDR KIRKLLASKY WEVAPKLEGE 300 LSNTDGDMKP VFRNRKIFYT RQRSLRNPCK RRKLEKSSVS TSDGGVSSEG ISSTPKKGTN 360 GSTIGSGSTI HGGSGASSSS VAGQESSSQS KDSHVKLSIK SFRVPELFIE IPETATVGSL 420 KRTVMEAVAA ILGEGLHVGV LYQGKKIRDD SKTLLQTGIC DEDKLDGLGF ALEPSPTNAP 480 SLCPKDPPFL VPCDTPQPLA RYPTSPALDP GISDASPDPP MINMANSVES DHDSVPSPTD 540 MSIDKNTPDS RALVAVPAMS VEALAVVPLH RKSRRSELVQ RRIRRPFSVT EVEALVQAVE 600 KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLAA 660 HAYWSQQQAK QQVKQLTETC LLLNTS

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MVLQKRLDYG FNGYQVPAMP RACRSARGRG SLKRKVEETQ MGAFELLATV AGKLLQERET  60
SPALSNESAR RTQITVVEDN VKQEQRDEEK SLKVEPCDQV SSHESVVVSE FGLQGHDQNN  120
NLQEFARAQN NVVSGPASLI VNCDLSEKVG SAEETATGKS RSGNTSSKVK GGSTDNVEYY  180
KGKVEGGIEK VGNLINGTVP DTCSSDDPLE SDTKPPALVS SDSSIEVPLL REHLTCGSFP  240
GCRDDVKLVS RDDEENSSGC TQPSTTPLKA SRPPPHIEDR KIRKLLASKY WEVAPKLEGE  300
LSNTDGDMKP VFRNRKIFYT RQRSLRNPCK RRKLEKSSVS TSDGGVSSEG ISSTPKKGTN  360
GSTIGSGSTI HGGSGASSSS VAGQESSSQS KDSHVKLSIK SFRVPELFIE IPETATVGSL  420
KRTVMEAVAA ILGEGLHVGV LYQGKKIRDD SKTLLQTGIC DEDKLDGLGF ALEPSPTNAP  480
SLCPKDPPFL VPCDTPQPLA RYPTSPALDP GISDASPDPP MINMANSVES DHDSVPSPTD  540
MSIDKNTPDS RALVAVPAMS VEALAVVPLH RKSRRSELVQ RRIRRPFSVT EVEALVQAVE  600
KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLAA  660
HAYWSQQQAK QQVKQLTETC LLLNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-122	MYB_related family protein