PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17567.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 377aa MW: 43161.6 Da PI: 6.2932

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.4	3.3e-27	63	143	2	85
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 W ++e++ Li +rre++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk+k+++++ s +++y+++l OVA17567.1 63 WVQEEIRSLISFRREVDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKTKHQDRGS---GSAKMSYYNEL 143 ********************************************************************84...45589999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MYLPEKPRPV DFYKDEGREM MMEVVSNGSL QSQQQQQQQQ MIIGESSGED HEVKVPKKRA 60 ETWVQEEIRS LISFRREVDG LFNTSKSNKH LWEQISSKMR EKGFDRSPTM CTDKWRNLLK 120 EFKKTKHQDR GSGSAKMSYY NELLELLEER KKNAPYKSPP TLSKVDSYIQ FSDKGLEDAS 180 IQFGSVEASG RSNLNLERRL DHDGHPLAIT AADAVAANGV PPWNWRVNPE NCGESNSYGG 240 KVISVKWGDF TRKIGIDGTA DAIKEAIKSA FGLRTKRAFW LEDGDEVVRS LDREMPLGTY 300 TLHLDEGLTI KICIYDESDR ILIRTEEKTL YTEDDFRDFL ARRGWTGLRE LSGFRSVDIL 360 NDLRPGAMYQ GVRLLGD

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MYLPEKPRPV DFYKDEGREM MMEVVSNGSL QSQQQQQQQQ MIIGESSGED HEVKVPKKRA  60
ETWVQEEIRS LISFRREVDG LFNTSKSNKH LWEQISSKMR EKGFDRSPTM CTDKWRNLLK  120
EFKKTKHQDR GSGSAKMSYY NELLELLEER KKNAPYKSPP TLSKVDSYIQ FSDKGLEDAS  180
IQFGSVEASG RSNLNLERRL DHDGHPLAIT AADAVAANGV PPWNWRVNPE NCGESNSYGG  240
KVISVKWGDF TRKIGIDGTA DAIKEAIKSA FGLRTKRAFW LEDGDEVVRS LDREMPLGTY  300
TLHLDEGLTI KICIYDESDR ILIRTEEKTL YTEDDFRDFL ARRGWTGLRE LSGFRSVDIL  360
NDLRPGAMYQ GVRLLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-176	Trihelix family protein