PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA17146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 787aa MW: 87265.9 Da PI: 6.8185 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 412 | 5.3e-126 | 424 | 780 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lLl+cAeav++++ e+a+++L ++sel++p g++ qR+a+yf eA++arl++s+ ++y+ lp+ + + ++ ++a+++f+ +sP++kfsh+taNq OVA17146.1 424 LTLLLQCAEAVATDNIEEANSMLLEISELSTPFGTSAQRVASYFSEAMSARLVSSCLGIYAPLPSGPHH---GQKMASAFQVFNGISPFVKFSHFTANQ 519 579*********************************************************999999988...9999*********************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 aI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g s e+le+tg+rL++fAe+lg+pfef + va+++ +l++e+L+v+++ OVA17146.1 520 AIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SMEALEATGKRLTDFAETLGLPFEFFP-VAEKVGNLDIERLNVSKR 613 *************************************************....***************************.7***************** PP GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298 Ea+aV++ + h+l+d ++s ++ +L+l+++l Pkvv++veq+++h ++sFl rf+ea++yysa+fdsl a++++eseer++vE++ll+rei+nv+ OVA17146.1 614 EAVAVHWLH--HSLYDVTGSDNN----TLWLLQRLAPKVVTMVEQDLSH-AGSFLGRFVEAIHYYSAMFDSLGASYGEESEERHVVEQQLLSREIRNVL 705 ********9..999999999999....**********************.899********************************************** PP GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 a g r+ + + +++Wre+l+++GF+ ++l +aa+qa+lll +++ dgy++ e++g+l lgWkd L+++SaWr OVA17146.1 706 AVGGPGRTGEVK-FQNWREKLKQVGFRGMSLAGNAATQANLLLGMFPCDGYTLLEDNGTLKLGWKDLYLLTASAWR 780 ******998887.**************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 787 aa Download sequence |
MAACVLLNSN GNNNNSTSTT NSRLGSTNNS DDRNFSSPPP PPPLTHHQLL ADPKMVRKRT 60 ASEMELQTGN NDHHRLPRRP TINSFTEIGR SSSSSMAFPN IVSSDNNNTT NPNPNNLNPI 120 TIPNHSTILP SPPTNSLTSG SSIFPSNFTY LESNLLPPPS LPAVCNFSGL PLFPSEENRN 180 VSGTIQTLPS SSQMDDSSAT TAWIDGIIKD LIHSSTNVSI PQLIQNVREI IHPCNPNLAT 240 LLEYRLRSLM EPVLDHNTDR RRKEVMGLQR QHQQIPMNSF PLSDPSTSSQ IPANHQFLNW 300 SLPNPPSTHD LNQQIHHNPQ QQNPISSVAP VLSLNQSVPP KPPHHHHHHR QQHQQEQQLP 360 PPPQQQQIPP PQQQQQQQRQ SSPQAVSSTT APSTPPPSSS QITIRDKREE IRQQKRDEEG 420 LHLLTLLLQC AEAVATDNIE EANSMLLEIS ELSTPFGTSA QRVASYFSEA MSARLVSSCL 480 GIYAPLPSGP HHGQKMASAF QVFNGISPFV KFSHFTANQA IQEAFEREER VHIIDLDIMQ 540 GLQWPGLFHI LASRPGGPPF VRLTGLGTSM EALEATGKRL TDFAETLGLP FEFFPVAEKV 600 GNLDIERLNV SKREAVAVHW LHHSLYDVTG SDNNTLWLLQ RLAPKVVTMV EQDLSHAGSF 660 LGRFVEAIHY YSAMFDSLGA SYGEESEERH VVEQQLLSRE IRNVLAVGGP GRTGEVKFQN 720 WREKLKQVGF RGMSLAGNAA TQANLLLGMF PCDGYTLLED NGTLKLGWKD LYLLTASAWR 780 PIHTTHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 0.0 | GRAS family protein |