PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17103.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 373aa MW: 41218.4 Da PI: 4.7856

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17103.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.5e-11	299	339	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+AveY+k Lq OVA17103.1 299 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 339 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MESVGTLSAG EWSSFNGIST DEADFMAQLL GNYSCPNDQD PGLTLGTPST IWPSHESNMN 60 MEGGDHESSY YCSDTVNTNN VYYYPQEINY TNRSSIFLPT PGLESYNVSN SNPTAATNNG 120 SLSMNFCMVN QQNSSSMKTF PDDVIEEPVC MKRELSSGSL GEPPCGNPQE DVVLSDQKLK 180 RKRKSDVSEP DTATEDNTNT TPLPSPKKKS RVSSDVQRNK KNLQMKKNQQ LGKDEEETNA 240 GLNRQSSCSY SSEDESNASQ ELNGGSTSTN SKKSGALNLN GKTRASRGSA TDPQSLYARK 300 RRERINERLR ILQNLVPNGT KVDISTMLEE AVEYVKFLQL QIKLLSSDDL WMYAPIAYNG 360 MDIGLDRKIP SPR

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MESVGTLSAG EWSSFNGIST DEADFMAQLL GNYSCPNDQD PGLTLGTPST IWPSHESNMN  60
MEGGDHESSY YCSDTVNTNN VYYYPQEINY TNRSSIFLPT PGLESYNVSN SNPTAATNNG  120
SLSMNFCMVN QQNSSSMKTF PDDVIEEPVC MKRELSSGSL GEPPCGNPQE DVVLSDQKLK  180
RKRKSDVSEP DTATEDNTNT TPLPSPKKKS RVSSDVQRNK KNLQMKKNQQ LGKDEEETNA  240
GLNRQSSCSY SSEDESNASQ ELNGGSTSTN SKKSGALNLN GKTRASRGSA TDPQSLYARK  300
RRERINERLR ILQNLVPNGT KVDISTMLEE AVEYVKFLQL QIKLLSSDDL WMYAPIAYNG  360
MDIGLDRKIP SPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	209	KRKRKSDVSEPDTATEDNTNTTPLPSPKKK
2	181	210	KRKRKSDVSEPDTATEDNTNTTPLPSPKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	7e-46	bHLH family protein