PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16770.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TALE

Protein Properties

Length: 319aa MW: 35895.1 Da PI: 4.7252

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	249	281	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +LA+ +gL+++q+ +WF N+R ++ OVA16770.1 249 PYPTEEEKMKLAEVTGLDQKQINNWFINQRKRH 281 8*****************************885 PP
2	ELK	37.4	5.4e-13	201	222	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sL++EF+ OVA16770.1 201 ELKEMLLRKYSGYLSSLRKEFL 222 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MEDLYRFDPT ISCSDDVALV QNFTHPPTGF HSQVDKMLQF EANETEIRGS EMSDLIKTQI 60 ASHPRYPNLV SAYIECRKVG APPEMASLLE EIGKESIICG GCTEIGTDPE LDEFMESYCK 120 VLIRYKEELS KPFDEATTFL NKIELQLSNL CKGTSTTTTT TTSGSYHSDE VAGSSEEEQS 180 CGEAEASESQ ESSAPRAADQ ELKEMLLRKY SGYLSSLRKE FLKKRKKGKL PKDARVTLLD 240 WWNTHYRWPY PTEEEKMKLA EVTGLDQKQI NNWFINQRKR HWKPSEDMRF ALMEGVGGGG 300 GPPVYFDSGG GPPHGTDDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	226	LRKEFLKKRK
2	223	227	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	3e-78	TALE family protein